RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 CLCN4P51793 760 aa15.7■□□□□ 0.1
CCDC58-207ENST00000498466 CDC42EP1Q00587 391 aa15.7■□□□□ 0.1
CCDC58-207ENST00000498466 LETM2Q2VYF4 491 aa15.7■□□□□ 0.1
CCDC58-207ENST00000498466 DHX32Q7L7V1 743 aaKnown RBP15.7■□□□□ 0.1
CCDC58-207ENST00000498466 KLHL5Q96PQ7 755 aa15.7■□□□□ 0.1
CCDC58-207ENST00000498466 TRAIPQ9BWF2 469 aa15.7■□□□□ 0.1
CCDC58-207ENST00000498466 FAM217BQ9NTX9 383 aaPredicted RBP15.7■□□□□ 0.1
CCDC58-207ENST00000498466 FAM105AQ9NUU6 356 aa15.7■□□□□ 0.1
CCDC58-207ENST00000498466 DNAJB4Q9UDY4 337 aa15.7■□□□□ 0.1
CCDC58-207ENST00000498466 SEPT9Q9UHD8 586 aaPredicted RBP15.7■□□□□ 0.1
CCDC58-207ENST00000498466 FAM186AA6NE01 2351 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 A0A087WZ62 844 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 MEIS3P2A8K0S8 358 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 NARSO43776 548 aaKnown RBP15.69■□□□□ 0.1
CCDC58-207ENST00000498466 GAS7O60861 476 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 OFD1O75665 1012 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 CNPP09543 421 aaKnown RBP15.69■□□□□ 0.1
CCDC58-207ENST00000498466 GNA11P29992 359 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 SFNP31947 248 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 CIITAP33076 1130 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 ADD1P35611 737 aaKnown RBP15.69■□□□□ 0.1
CCDC58-207ENST00000498466 DNM2P50570 870 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 EXOSC10Q01780 885 aaKnown RBP15.69■□□□□ 0.1
CCDC58-207ENST00000498466 MTERF2Q49AM1 385 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 C15orf39Q6ZRI6 1047 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 LENG9Q96B70 501 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 FDXACB1Q9BRP7 624 aaPredicted RBP15.69■□□□□ 0.1
CCDC58-207ENST00000498466 VN1R3Q9BXE9 311 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 INO80BQ9C086 356 aaPredicted RBP15.69■□□□□ 0.1
CCDC58-207ENST00000498466 IGSF9Q9P2J2 1179 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 STK39Q9UEW8 545 aa15.69■□□□□ 0.1
CCDC58-207ENST00000498466 MYH9P35579 1960 aaKnown RBP15.69■□□□□ 0.1
CCDC58-207ENST00000498466 MSH4O15457 936 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 LMNAP02545 664 aaKnown RBP15.68■□□□□ 0.1
CCDC58-207ENST00000498466 CFHP08603 1231 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 RAB27AP51159 221 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 JAK3P52333 1124 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 TARBP2Q15633 366 aaKnown RBP15.68■□□□□ 0.1
CCDC58-207ENST00000498466 LRCH2Q5VUJ6 765 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 CATSPER4Q7RTX7 472 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 ZNF280BQ86YH2 543 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 RHPN2Q8IUC4 686 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 URGCPQ8TCY9 931 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 PGBD4Q96DM1 585 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 RIT2Q99578 217 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 TEKT3Q9BXF9 490 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 UNC45AQ9H3U1 944 aa15.68■□□□□ 0.1
CCDC58-207ENST00000498466 MRPL17Q9NRX2 175 aaKnown RBP15.68■□□□□ 0.1
CCDC58-207ENST00000498466 CCDC196A0A1B0GTZ2 297 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 TMEM150BA6NC51 233 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 ZNF623O75123 536 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 GBP2P32456 591 aaPredicted RBP15.67■□□□□ 0.1
CCDC58-207ENST00000498466 RCAN1P53805 252 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 FGD1P98174 961 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 NONOQ15233 471 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCDC58-207ENST00000498466 ZNF410Q86VK4 478 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 BICD2Q8TD16 824 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 RSAD2Q8WXG1 361 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 CCDC136Q96JN2 1154 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 NLRP4Q96MN2 994 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 FAM193BQ96PV7 902 aaPredicted RBP15.67■□□□□ 0.1
CCDC58-207ENST00000498466 SH2D3AQ9BRG2 576 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 SEMA4AQ9H3S1 761 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 MAN1C1Q9NR34 630 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 SUCLA2Q9P2R7 463 aaPredicted RBP15.67■□□□□ 0.1
CCDC58-207ENST00000498466 WNT16Q9UBV4 365 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 DENND4AQ7Z401 1863 aa15.67■□□□□ 0.1
CCDC58-207ENST00000498466 C2CD2LO14523 706 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 B4GALT3O60512 393 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 ALDH2P05091 517 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 AK2P54819 239 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 ADCK5Q3MIX3 580 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 XKR3Q5GH77 459 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 MIER3Q7Z3K6 550 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 KSR1Q8IVT5 923 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 RIN2Q8WYP3 895 aaPredicted RBP15.66■□□□□ 0.1
CCDC58-207ENST00000498466 STAMQ92783 540 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 SLC5A5Q92911 643 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 GJA10Q969M2 543 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 RMDN1Q96DB5 314 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 YTHDC1Q96MU7 727 aaKnown RBP15.66■□□□□ 0.1
CCDC58-207ENST00000498466 NIFKQ9BYG3 293 aaKnown RBP15.66■□□□□ 0.1
CCDC58-207ENST00000498466 CA14Q9ULX7 337 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 FAN1Q9Y2M0 1017 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 PCDHB2Q9Y5E7 798 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 R4GN57 208 aa15.66■□□□□ 0.1
CCDC58-207ENST00000498466 IGKV6-21A0A0C4DH24 114 aa15.65■□□□□ 0.1
CCDC58-207ENST00000498466 CCDC195A0A1B0GUA6 201 aa15.65■□□□□ 0.1
CCDC58-207ENST00000498466 KRBA1A5PL33 1030 aa15.65■□□□□ 0.1
CCDC58-207ENST00000498466 LILRB3O75022 631 aa15.65■□□□□ 0.1
CCDC58-207ENST00000498466 ABCB7O75027 752 aa15.65■□□□□ 0.1
CCDC58-207ENST00000498466 N4BP1O75113 896 aaKnown RBP15.65■□□□□ 0.1
CCDC58-207ENST00000498466 DDHD2O94830 711 aa15.65■□□□□ 0.1
CCDC58-207ENST00000498466 URODP06132 367 aa15.65■□□□□ 0.1
CCDC58-207ENST00000498466 AKAP17AQ02040 695 aaKnown RBP15.65■□□□□ 0.1
CCDC58-207ENST00000498466 ELMSAN1Q6PJG2 1045 aa15.65■□□□□ 0.1
CCDC58-207ENST00000498466 AGMOQ6ZNB7 445 aa15.65■□□□□ 0.1
CCDC58-207ENST00000498466 KIAA2013Q8IYS2 634 aa15.65■□□□□ 0.1
CCDC58-207ENST00000498466 CMASQ8NFW8 434 aaPredicted RBP15.65■□□□□ 0.1
CCDC58-207ENST00000498466 RDM1Q8NG50 284 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms