RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CYP2C18P33260 490 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 CASP5P51878 434 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 CCL23P55773 120 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 KCNB1Q14721 858 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 TMEM132AQ24JP5 1023 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 CDCA2Q69YH5 1023 aaPredicted RBP14.95□□□□□ -0.02
CPNE1-227ENST00000498056 STXBP4Q6ZWJ1 553 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 SMYD4Q8IYR2 804 aaPredicted RBP14.95□□□□□ -0.02
CPNE1-227ENST00000498056 GLIS3Q8NEA6 775 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 TMEM40Q8WWA1 233 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 SPIRE2Q8WWL2 714 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 WNT8AQ9H1J5 351 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 ADAMTS10Q9H324 1103 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 SLC39A2Q9NP94 309 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 PCDH10Q9P2E7 1040 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 ARHGAP28Q9P2N2 729 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 GDAQ9Y2T3 454 aa14.95□□□□□ -0.02
CPNE1-227ENST00000498056 TDRD15B5MCY1 1934 aaKnown RBP14.94□□□□□ -0.02
CPNE1-227ENST00000498056 CSDE1O75534 798 aaKnown RBP14.94□□□□□ -0.02
CPNE1-227ENST00000498056 PRKCBP05771 671 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 FGFR4P22455 802 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 SFPQP23246 707 aaKnown RBP eCLIP14.94□□□□□ -0.02
CPNE1-227ENST00000498056 CRYBB1P53674 252 aaPredicted RBP14.94□□□□□ -0.02
CPNE1-227ENST00000498056 CDC42EP1Q00587 391 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 EHHADHQ08426 723 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 ZC2HC1CQ53FD0 456 aaPredicted RBP14.94□□□□□ -0.02
CPNE1-227ENST00000498056 L1TD1Q5T7N2 865 aaKnown RBP14.94□□□□□ -0.02
CPNE1-227ENST00000498056 HAUS6Q7Z4H7 955 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 KIAA0895Q8NCT3 520 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 SLC17A8Q8NDX2 589 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 TMEM161BQ8NDZ6 487 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 SPATA20Q8TB22 786 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 DPF3Q92784 378 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 SCLYQ96I15 445 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 FIZ1Q96SL8 496 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 CDHR5Q9HBB8 845 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 IFT122Q9HBG6 1241 aa14.94□□□□□ -0.02
CPNE1-227ENST00000498056 UBE4BO95155 1302 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 TRIM43BA6NCK2 446 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 MAPTP10636 758 aaKnown RBP14.93□□□□□ -0.02
CPNE1-227ENST00000498056 DARSP14868 501 aaKnown RBP14.93□□□□□ -0.02
CPNE1-227ENST00000498056 RAG1P15918 1043 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 SYN1P17600 705 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 EFNA5P52803 228 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 PTENP60484 403 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 MBTD1Q05BQ5 628 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 STRN3Q13033 797 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 PAK2Q13177 524 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 MAPK6Q16659 721 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 FBXO47Q5MNV8 452 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 ZNF658Q5TYW1 1059 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-227ENST00000498056 TRAF7Q6Q0C0 670 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 RBM43Q6ZSC3 357 aaKnown RBP14.93□□□□□ -0.02
CPNE1-227ENST00000498056 CATSPER4Q7RTX7 472 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 SRGAP1Q7Z6B7 1085 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 NELFCDQ8IXH7 590 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 ZNF710Q8N1W2 664 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 TRIM43Q96BQ3 446 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-227ENST00000498056 HVCN1Q96D96 273 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 BICD1Q96G01 975 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 NFKBIZQ9BYH8 718 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 CCDC113Q9H0I3 377 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 MINDY3Q9H8M7 445 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 KCNG1Q9UIX4 513 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 MAPK8IP1Q9UQF2 711 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 GBF1Q92538 1859 aa14.93□□□□□ -0.02
CPNE1-227ENST00000498056 SYCE3A1L190 88 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 KIAA0355O15063 1070 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 RPS6KA5O75582 802 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 PRPF6O94906 941 aaKnown RBP14.92□□□□□ -0.02
CPNE1-227ENST00000498056 IQCF3P0C7M6 154 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 EIF4BP23588 611 aaKnown RBP14.92□□□□□ -0.02
CPNE1-227ENST00000498056 SARSP49591 514 aaKnown RBP14.92□□□□□ -0.02
CPNE1-227ENST00000498056 STK4Q13043 487 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 PSMD2Q13200 908 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 ALCAMQ13740 583 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 LPIN1Q14693 890 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 MBTPS1Q14703 1052 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 FAM26DQ5JW98 314 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 NT5DC1Q5TFE4 455 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 SASS6Q6UVJ0 657 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 TSHZ1Q6ZSZ6 1077 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 FAM228AQ86W67 206 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 IFNLR1Q8IU57 520 aaPredicted RBP14.92□□□□□ -0.02
CPNE1-227ENST00000498056 TRIML1Q8N9V2 468 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 GZF1Q9H116 711 aaPredicted RBP14.92□□□□□ -0.02
CPNE1-227ENST00000498056 PRMT7Q9NVM4 692 aaPredicted RBP14.92□□□□□ -0.02
CPNE1-227ENST00000498056 ZMYND8Q9ULU4 1186 aaPredicted RBP14.92□□□□□ -0.02
CPNE1-227ENST00000498056 NOC2LQ9Y3T9 749 aaKnown RBP14.92□□□□□ -0.02
CPNE1-227ENST00000498056 ZMYM2Q9UBW7 1377 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 CNTNAP2Q9UHC6 1331 aa14.92□□□□□ -0.02
CPNE1-227ENST00000498056 K7ERI5 159 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 HNRNPDLO14979 420 aaKnown RBP14.91□□□□□ -0.02
CPNE1-227ENST00000498056 EIF3DO15371 548 aaKnown RBP eCLIP14.91□□□□□ -0.02
CPNE1-227ENST00000498056 B4GALT5O43286 388 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 TSPAN1O60635 241 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 TIMP1P01033 207 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 EDN1P05305 212 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 CD52P31358 61 aa14.91□□□□□ -0.02
CPNE1-227ENST00000498056 ABCD1P33897 745 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms