RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 HCFC2Q9Y5Z7 792 aa20.42■□□□□ 0.86
ATPAF2-209ENST00000497871 CCNT1O60563 726 aaKnown RBP20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 CLASP2O75122 1294 aaKnown RBP20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 OFD1O75665 1012 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 NPEPPSP55786 919 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 NOMO2Q5JPE7 1267 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 VPS52Q8N1B4 723 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 LPPQ93052 612 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 PGBD4Q96DM1 585 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 CEP170P1Q96L14 293 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 ADAM7Q9H2U9 754 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 COL4A3BPQ9Y5P4 624 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 IRAK3Q9Y616 596 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 STK36Q9NRP7 1315 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 WDR81Q562E7 1941 aa20.41■□□□□ 0.86
ATPAF2-209ENST00000497871 MARCH6O60337 910 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 PFKFB2O60825 505 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 ZC3H11AO75152 810 aaKnown RBP eCLIP20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 GALTP07902 379 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 POLGP54098 1239 aaPredicted RBP20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 ITIH3Q06033 890 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 SIGLEC14Q08ET2 396 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 GIT2Q14161 759 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 EPHA7Q15375 998 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 LONRF3Q496Y0 759 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 CES5AQ6NT32 575 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 OTUD6AQ7L8S5 288 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 SRGAP1Q7Z6B7 1085 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 DDX53Q86TM3 631 aaKnown RBP20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 C4orf19Q8IY42 314 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 ZNF579Q8NAF0 562 aaKnown RBP20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 PRPF31Q8WWY3 499 aaKnown RBP20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 HAS1Q92839 578 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 DHX33Q9H6R0 707 aaKnown RBP20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 NRDE2Q9H7Z3 1164 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 AGPAT5Q9NUQ2 364 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 TBC1D13Q9NVG8 400 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 TPCN1Q9ULQ1 816 aa20.4■□□□□ 0.86
ATPAF2-209ENST00000497871 RFC5P40937 340 aa20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 PTPN21Q16825 1174 aa20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 PIK3AP1Q6ZUJ8 805 aa20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 TMEM173Q86WV6 379 aaPredicted RBP20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 TMEM87AQ8NBN3 555 aa20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 OXER1Q8TDS5 423 aa20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 PSPC1Q8WXF1 523 aaKnown RBP20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 IGSF21Q96ID5 467 aa20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 NECTIN4Q96NY8 510 aa20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 ZBP1Q9H171 429 aa20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 GJB4Q9NTQ9 266 aa20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 WRAP73Q9P2S5 460 aaPredicted RBP20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 NR2E1Q9Y466 385 aa20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 PCDHB2Q9Y5E7 798 aa20.39■□□□□ 0.85
ATPAF2-209ENST00000497871 MEIS3P2A8K0S8 358 aa20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 ASAP2O43150 1006 aa20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 SRGAP2CP0DJJ0 459 aa20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 CTSAP10619 480 aa20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 YWHABP31946 246 aaKnown RBP20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 CA8P35219 290 aa20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 RNASELQ05823 741 aaKnown RBP20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 MRPL10Q7Z7H8 261 aaKnown RBP20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 SUGP1Q8IWZ8 645 aaKnown RBP20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 SLFN12Q8IYM2 578 aa20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 WASF1Q92558 559 aa20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 TMEM143Q96AN5 459 aa20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 PRRX2Q99811 253 aa20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 INPP5FQ9Y2H2 1132 aa20.38■□□□□ 0.85
ATPAF2-209ENST00000497871 ZNF318Q5VUA4 2279 aa20.37■□□□□ 0.85
ATPAF2-209ENST00000497871 GAS2O43903 313 aaKnown RBP20.37■□□□□ 0.85
ATPAF2-209ENST00000497871 BAG4O95429 457 aaKnown RBP20.37■□□□□ 0.85
ATPAF2-209ENST00000497871 LAMTOR4Q0VGL1 99 aa20.37■□□□□ 0.85
ATPAF2-209ENST00000497871 FBXL6Q8N531 539 aa20.37■□□□□ 0.85
ATPAF2-209ENST00000497871 TCP11Q8WWU5 503 aa20.37■□□□□ 0.85
ATPAF2-209ENST00000497871 LXNQ9BS40 222 aa20.37■□□□□ 0.85
ATPAF2-209ENST00000497871 ZSWIM4Q9H7M6 989 aa20.37■□□□□ 0.85
ATPAF2-209ENST00000497871 RGL1Q9NZL6 768 aa20.37■□□□□ 0.85
ATPAF2-209ENST00000497871 KANSL3Q9P2N6 904 aa20.37■□□□□ 0.85
ATPAF2-209ENST00000497871 STK39Q9UEW8 545 aa20.37■□□□□ 0.85
ATPAF2-209ENST00000497871 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 CTDNEP1O95476 244 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 ALDH2P05091 517 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 HOXA11P31270 313 aaPredicted RBP20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 MTHFRP42898 656 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 MRE11P49959 708 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 ANAPC15P60006 121 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 ANKRD1Q15327 319 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 EARS2Q5JPH6 523 aaKnown RBP20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 AGMOQ6ZNB7 445 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 ZNF280BQ86YH2 543 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 POTEDQ86YR6 584 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 URGCPQ8TCY9 931 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 ASIC4Q96FT7 647 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 MINDY3Q9H8M7 445 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 DZANK1Q9NVP4 752 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 ORC3Q9UBD5 711 aaPredicted RBP20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 DNAJB4Q9UDY4 337 aa20.36■□□□□ 0.85
ATPAF2-209ENST00000497871 CNTNAP2Q9UHC6 1331 aa20.35■□□□□ 0.85
ATPAF2-209ENST00000497871 SLC11A1P49279 550 aa20.35■□□□□ 0.85
ATPAF2-209ENST00000497871 SPIRE1Q08AE8 756 aa20.35■□□□□ 0.85
ATPAF2-209ENST00000497871 PCBP1Q15365 356 aaKnown RBP eCLIP20.35■□□□□ 0.85
ATPAF2-209ENST00000497871 XKR9Q5GH70 373 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms