RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 NFKBIZQ9BYH8 718 aa17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 DDX19AQ9NUU7 478 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 DACT1Q9NYF0 836 aa17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 PIN4Q9Y237 131 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 RWDD3Q9Y3V2 267 aa17.72■□□□□ 0.43
CTDSP1-214ENST00000497677 ARHGEF35A5YM69 484 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 VWA3AA6NCI4 1184 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 ZNF623O75123 536 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 CTNNB1P35222 781 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 PHKA2P46019 1235 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 AMHR2Q16671 573 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 CLLU1OSQ5K130 101 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 HYIQ5T013 277 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 KRT79Q5XKE5 535 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 LRRC55Q6ZSA7 311 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 MICALL1Q8N3F8 863 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 PLVAPQ9BX97 442 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 TMEM117Q9H0C3 514 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 BHMT2Q9H2M3 363 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 HCSTQ9UBK5 93 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 TRANK1O15050 2925 aa17.71■□□□□ 0.43
CTDSP1-214ENST00000497677 LOXHD1Q8IVV2 1947 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 E9PMD0 336 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 MBTD1Q05BQ5 628 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 TFDP1Q14186 410 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 PCBP1Q15365 356 aaKnown RBP eCLIP17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 SF3A1Q15459 793 aaKnown RBP17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 UBXN11Q5T124 520 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 FAM173BQ6P4H8 233 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 BSNDQ8WZ55 320 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 MRPL38Q96DV4 380 aaKnown RBP17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 PNMA5Q96PV4 448 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 CWH43Q9H720 699 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 FAM105AQ9NUU6 356 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 TYW1Q9NV66 732 aaKnown RBP17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 PLAGL2Q9UPG8 496 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 CLIC4Q9Y696 253 aa17.7■□□□□ 0.42
CTDSP1-214ENST00000497677 GRM6O15303 877 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 HOXA2O43364 376 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 TSPAN1O60635 241 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 EYA4O95677 639 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 BMP15O95972 392 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 KRT85P78386 507 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 GRIN1Q05586 938 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 CAMK1Q14012 370 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 PTPAQ15257 358 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 FOXD4L5Q5VV16 416 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 TWF2Q6IBS0 349 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 TMEM87AQ8NBN3 555 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 FOXD4L4Q8WXT5 416 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 P2RX5Q93086 422 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 C11orf84Q9BUA3 381 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 POLD4Q9HCU8 107 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 DNM3Q9UQ16 869 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 UNC80Q8N2C7 3258 aa17.69■□□□□ 0.42
CTDSP1-214ENST00000497677 MEIS3P2A8K0S8 358 aa17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 INO80B-WBP1J3KQ70 363 aa17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 ITGB1P05556 798 aa17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 NCLP19338 710 aaKnown RBP17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 NAALADL2Q58DX5 795 aa17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 CDCA2Q69YH5 1023 aaPredicted RBP17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 MRPL10Q7Z7H8 261 aaKnown RBP17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 KLHL23Q8NBE8 558 aa17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 RNF169Q8NCN4 708 aa17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 SPPL3Q8TCT6 385 aa17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 SCAND2PQ9GZW5 306 aaPredicted RBP17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 CFAP45Q9UL16 551 aa17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 PCDHB2Q9Y5E7 798 aa17.68■□□□□ 0.42
CTDSP1-214ENST00000497677 SKIP12755 728 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 DNAJB1P25685 340 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 AXLP30530 894 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 RAB27AP51159 221 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 TMEM119Q4V9L6 283 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 C1orf186Q6ZWK4 172 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 DAW1Q8N136 415 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 KCTD17Q8N5Z5 321 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 HELQQ8TDG4 1101 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 LPPQ93052 612 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 AK8Q96MA6 479 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 ZNF396Q96N95 335 aaPredicted RBP17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 RUSC1Q9BVN2 902 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 FZD8Q9H461 694 aa17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 ALG13Q9NP73 1137 aaKnown RBP17.67■□□□□ 0.42
CTDSP1-214ENST00000497677 LRRIQ4A6NIV6 560 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 B4GALT5O43286 388 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 OFD1O75665 1012 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 ERLIN2O94905 339 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 ARF4P18085 180 aaPredicted RBP17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 PTPROQ16827 1216 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 LONRF3Q496Y0 759 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 RINT1Q6NUQ1 792 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 AGMOQ6ZNB7 445 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 SMG8Q8ND04 991 aaKnown RBP17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 LRRC15Q8TF66 581 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 CPB2Q96IY4 423 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 PLIN2Q99541 437 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 LMAN2LQ9H0V9 348 aa17.66■□□□□ 0.42
CTDSP1-214ENST00000497677 A0A1B0GUA9 196 aa17.65■□□□□ 0.42
CTDSP1-214ENST00000497677 TTLL13PA6NNM8 815 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms