RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 FAM133AQ8N9E0 248 aa9.05□□□□□ -0.96
VPS45-210ENST00000497638 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.05□□□□□ -0.96
VPS45-210ENST00000497638 STK35Q8TDR2 534 aa9.05□□□□□ -0.96
VPS45-210ENST00000497638 SSH3Q8TE77 659 aa9.05□□□□□ -0.96
VPS45-210ENST00000497638 DUSP23Q9BVJ7 150 aa9.05□□□□□ -0.96
VPS45-210ENST00000497638 TRMT13Q9NUP7 481 aaKnown RBP9.05□□□□□ -0.96
VPS45-210ENST00000497638 DCTN4Q9UJW0 460 aa9.05□□□□□ -0.96
VPS45-210ENST00000497638 VAV3Q9UKW4 847 aa9.05□□□□□ -0.96
VPS45-210ENST00000497638 TET1Q8NFU7 2136 aa9.05□□□□□ -0.96
VPS45-210ENST00000497638 SPTBN4Q9H254 2564 aa9.05□□□□□ -0.96
VPS45-210ENST00000497638 GREB1LQ9C091 1923 aaPredicted RBP9.04□□□□□ -0.96
VPS45-210ENST00000497638 BAZ2AQ9UIF9 1905 aaKnown RBP9.04□□□□□ -0.96
VPS45-210ENST00000497638 PNMA6FA0A0J9YX94 578 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 ANP32CO43423 234 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 SURF6O75683 361 aaKnown RBP9.04□□□□□ -0.96
VPS45-210ENST00000497638 PAPLNO95428 1278 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 CYP2C9P11712 490 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 NME2P22392 152 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 PLCB3Q01970 1234 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 PRKCQQ04759 706 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 SLC9C2Q5TAH2 1124 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 C12orf60Q5U649 245 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 IQSEC1Q6DN90 963 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 WFDC3Q8IUB2 231 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 LCORLQ8N3X6 602 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 POU5F2Q8N7G0 328 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 ISL2Q96A47 359 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 EAF2Q96CJ1 260 aaPredicted RBP9.04□□□□□ -0.96
VPS45-210ENST00000497638 FTOQ9C0B1 505 aaKnown RBP eCLIP9.04□□□□□ -0.96
VPS45-210ENST00000497638 CCDC8Q9H0W5 538 aaPredicted RBP9.04□□□□□ -0.96
VPS45-210ENST00000497638 ACAD9Q9H845 621 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 SLC38A10Q9HBR0 1119 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 RAVER2Q9HCJ3 691 aaKnown RBP9.04□□□□□ -0.96
VPS45-210ENST00000497638 ATP8A2Q9NTI2 1148 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 PRKAG3Q9UGI9 489 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 FAM50BQ9Y247 325 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 SCN10AQ9Y5Y9 1956 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 ZNF532Q9HCE3 1301 aa9.04□□□□□ -0.96
VPS45-210ENST00000497638 TRIOO75962 3097 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 NDUFB10O96000 172 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 C8AP07357 584 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 IQCF3P0C7M6 154 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 ERVK-21P61565 698 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 CNTN2Q02246 1040 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 BFSP2Q13515 415 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 LRRFIP1Q32MZ4 808 aaKnown RBP9.03□□□□□ -0.96
VPS45-210ENST00000497638 ZC3H12AQ5D1E8 599 aaKnown RBP9.03□□□□□ -0.96
VPS45-210ENST00000497638 TOP6BLQ8N6T0 577 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 RNF214Q8ND24 703 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 PI4K2BQ8TCG2 481 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 GPBAR1Q8TDU6 330 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.03□□□□□ -0.96
VPS45-210ENST00000497638 HRASLS5Q96KN8 279 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 TGS1Q96RS0 853 aaKnown RBP9.03□□□□□ -0.96
VPS45-210ENST00000497638 NUP88Q99567 741 aaPredicted RBP9.03□□□□□ -0.96
VPS45-210ENST00000497638 PRRX2Q99811 253 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 RC3H2Q9HBD1 1191 aaKnown RBP9.03□□□□□ -0.96
VPS45-210ENST00000497638 MKNK2Q9HBH9 465 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 VTA1Q9NP79 307 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 NOP58Q9Y2X3 529 aaKnown RBP9.03□□□□□ -0.96
VPS45-210ENST00000497638 PTPRSQ13332 1948 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 TECTAO75443 2155 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 SIP14410 1827 aa9.03□□□□□ -0.96
VPS45-210ENST00000497638 TCRBV5S4A2TA0A5A2 114 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 LCHNA4D1U4 455 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 F5H6K3 240 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 IPO8O15397 1037 aaKnown RBP9.02□□□□□ -0.97
VPS45-210ENST00000497638 CEACAM5P06731 702 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 FUT4P22083 530 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 MAPK1P28482 360 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 CD96P40200 585 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 CPT1AP50416 773 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 RARSP54136 660 aaKnown RBP9.02□□□□□ -0.97
VPS45-210ENST00000497638 WDR5P61964 334 aaKnown RBP9.02□□□□□ -0.97
VPS45-210ENST00000497638 ATP8B2P98198 1209 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 ZP2Q05996 745 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 KLRC3Q07444 240 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 TRMT2AQ8IZ69 625 aaKnown RBP9.02□□□□□ -0.97
VPS45-210ENST00000497638 NEK9Q8TD19 979 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 MTG1Q9BT17 334 aaPredicted RBP9.02□□□□□ -0.97
VPS45-210ENST00000497638 UPF3BQ9BZI7 483 aaKnown RBP9.02□□□□□ -0.97
VPS45-210ENST00000497638 ARMT1Q9H993 441 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 A1CFQ9NQ94 594 aaKnown RBP9.02□□□□□ -0.97
VPS45-210ENST00000497638 HOMER2Q9NSB8 354 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 NYAP2Q9P242 653 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 FEM1BQ9UK73 627 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 USP34Q70CQ2 3546 aa9.02□□□□□ -0.97
VPS45-210ENST00000497638 RIF1Q5UIP0 2472 aaKnown RBP9.02□□□□□ -0.97
VPS45-210ENST00000497638 ZFHX2Q9C0A1 2572 aaPredicted RBP9.01□□□□□ -0.97
VPS45-210ENST00000497638 CYP2D7A0A087X1C5 515 aa9.01□□□□□ -0.97
VPS45-210ENST00000497638 KRTAP4-8A0A0G2JLE6 195 aa9.01□□□□□ -0.97
VPS45-210ENST00000497638 MBD4O95243 580 aa9.01□□□□□ -0.97
VPS45-210ENST00000497638 GJB5O95377 273 aa9.01□□□□□ -0.97
VPS45-210ENST00000497638 PARNO95453 639 aaKnown RBP9.01□□□□□ -0.97
VPS45-210ENST00000497638 TRIM27P14373 513 aa9.01□□□□□ -0.97
VPS45-210ENST00000497638 ITIH2P19823 946 aa9.01□□□□□ -0.97
VPS45-210ENST00000497638 OXCT1P55809 520 aa9.01□□□□□ -0.97
VPS45-210ENST00000497638 PURAQ00577 322 aaKnown RBP9.01□□□□□ -0.97
VPS45-210ENST00000497638 PTPN11Q06124 597 aaPredicted RBP9.01□□□□□ -0.97
VPS45-210ENST00000497638 TKFCQ3LXA3 575 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms