RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, human

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-219	ENST00000497483	MRPS27	Q92552	414 aa	Known RBP	27.65	■■■□□ 2.02
HDAC10-219	ENST00000497483	LINC01565	O15544	149 aa		27.64	■■■□□ 2.02
HDAC10-219	ENST00000497483	RARRES1	P49788	294 aa		27.64	■■■□□ 2.02
HDAC10-219	ENST00000497483	MXD4	Q14582	209 aa	Predicted RBP	27.64	■■■□□ 2.02
HDAC10-219	ENST00000497483	PCBP1	Q15365	356 aa	Known RBP eCLIP	27.64	■■■□□ 2.02
HDAC10-219	ENST00000497483	FAM184A	Q8NB25	1140 aa		27.64	■■■□□ 2.02
HDAC10-219	ENST00000497483	IGFLR1	Q9H665	355 aa		27.64	■■■□□ 2.02
HDAC10-219	ENST00000497483	MINDY3	Q9H8M7	445 aa		27.64	■■■□□ 2.02
HDAC10-219	ENST00000497483	PRKAG3	Q9UGI9	489 aa		27.64	■■■□□ 2.02
HDAC10-219	ENST00000497483	SRGAP2C	P0DJJ0	459 aa		27.63	■■■□□ 2.01
HDAC10-219	ENST00000497483	XRCC6	P12956	609 aa	Known RBP eCLIP	27.63	■■■□□ 2.01
HDAC10-219	ENST00000497483	NRIP1	P48552	1158 aa		27.63	■■■□□ 2.01
HDAC10-219	ENST00000497483	TRAPPC10	P48553	1259 aa		27.63	■■■□□ 2.01
HDAC10-219	ENST00000497483	POU5F1B	Q06416	359 aa		27.63	■■■□□ 2.01
HDAC10-219	ENST00000497483	IFNLR1	Q8IU57	520 aa	Predicted RBP	27.63	■■■□□ 2.01
HDAC10-219	ENST00000497483	NOSTRIN	Q8IVI9	506 aa		27.63	■■■□□ 2.01
HDAC10-219	ENST00000497483	RNF149	Q8NC42	400 aa		27.63	■■■□□ 2.01
HDAC10-219	ENST00000497483	TUFT1	Q9NNX1	390 aa		27.63	■■■□□ 2.01
HDAC10-219	ENST00000497483	CD320	Q9NPF0	282 aa		27.63	■■■□□ 2.01
HDAC10-219	ENST00000497483	PCDHGC5	Q9Y5F6	944 aa		27.63	■■■□□ 2.01
HDAC10-219	ENST00000497483	CARNS1	A5YM72	827 aa		27.62	■■■□□ 2.01
HDAC10-219	ENST00000497483	OR52Z1	P0C646	297 aa		27.62	■■■□□ 2.01
HDAC10-219	ENST00000497483	ATP2B1	P20020	1258 aa		27.62	■■■□□ 2.01
HDAC10-219	ENST00000497483	ERVFC1	P60507	584 aa		27.62	■■■□□ 2.01
HDAC10-219	ENST00000497483	SMAD4	Q13485	552 aa	Known RBP	27.62	■■■□□ 2.01
HDAC10-219	ENST00000497483	SLC39A11	Q8N1S5	342 aa		27.62	■■■□□ 2.01
HDAC10-219	ENST00000497483	MSLNL	Q96KJ4	702 aa		27.62	■■■□□ 2.01
HDAC10-219	ENST00000497483	CCDC43	Q96MW1	224 aa	Known RBP	27.62	■■■□□ 2.01
HDAC10-219	ENST00000497483	CDCA3	Q99618	268 aa	Predicted RBP	27.62	■■■□□ 2.01
HDAC10-219	ENST00000497483	SPG21	Q9NZD8	308 aa		27.62	■■■□□ 2.01
HDAC10-219	ENST00000497483	PUF60	Q9UHX1	559 aa	Known RBP	27.62	■■■□□ 2.01
HDAC10-219	ENST00000497483	MBTPS2	O43462	519 aa		27.61	■■■□□ 2.01
HDAC10-219	ENST00000497483	SPATA31C1	P0DKV0	1188 aa		27.61	■■■□□ 2.01
HDAC10-219	ENST00000497483	NDUFV1	P49821	464 aa		27.61	■■■□□ 2.01
HDAC10-219	ENST00000497483	PTEN	P60484	403 aa		27.61	■■■□□ 2.01
HDAC10-219	ENST00000497483	SMAD2	Q15796	467 aa	Known RBP	27.61	■■■□□ 2.01
HDAC10-219	ENST00000497483	GJD3	Q8N144	294 aa		27.61	■■■□□ 2.01
HDAC10-219	ENST00000497483	C1QTNF1	Q9BXJ1	281 aa		27.61	■■■□□ 2.01
HDAC10-219	ENST00000497483	CD207	Q9UJ71	328 aa		27.61	■■■□□ 2.01
HDAC10-219	ENST00000497483	GLP2R	O95838	553 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	HOXA11	P31270	313 aa	Predicted RBP	27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	PBX3	P40426	434 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	TFDP1	Q14186	410 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	DUSP6	Q16828	381 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	TTC38	Q5R3I4	469 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	GLB1L	Q6UWU2	654 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	MICAL1	Q8TDZ2	1067 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	LPP	Q93052	612 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	PGBD4	Q96DM1	585 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	POLR3C	Q9BUI4	534 aa	Predicted RBP	27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	NFKBIZ	Q9BYH8	718 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	TLE6	Q9H808	572 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	CLEC1B	Q9P126	229 aa		27.6	■■■□□ 2.01
HDAC10-219	ENST00000497483	ST18	O60284	1047 aa		27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	EYA4	O95677	639 aa		27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	U2AF2	P26368	475 aa	Known RBP eCLIP	27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	AXL	P30530	894 aa		27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	ARL2	P36404	184 aa		27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	KRT17	Q04695	432 aa		27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	ZP2	Q05996	745 aa		27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	COASY	Q13057	564 aa		27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	GNL2	Q13823	731 aa	Known RBP	27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	CAPS	Q13938	189 aa		27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	MRPL10	Q7Z7H8	261 aa	Known RBP	27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	RBM23	Q86U06	439 aa	Known RBP	27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	PIGO	Q8TEQ8	1089 aa		27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	NGRN	Q9NPE2	291 aa	Known RBP	27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	DBR1	Q9UK59	544 aa	Known RBP	27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	NOL7	Q9UMY1	257 aa	Known RBP	27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	PCDHB2	Q9Y5E7	798 aa		27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	CNTNAP2	Q9UHC6	1331 aa		27.59	■■■□□ 2.01
HDAC10-219	ENST00000497483	MEIS3P2	A8K0S8	358 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	ERLIN2	O94905	339 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	ZNF174	Q15697	407 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	CLUL1	Q15846	466 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	NOMO2	Q5JPE7	1267 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	UBXN11	Q5T124	520 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	CATSPER3	Q86XQ3	398 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	ADHFE1	Q8IWW8	467 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	SMRP1	Q8NCR6	262 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	ERMN	Q8TAM6	284 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	ASAP3	Q8TDY4	903 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	TCF25	Q9BQ70	676 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	TBC1D13	Q9NVG8	400 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	C5orf42	Q9H799	3197 aa		27.58	■■■□□ 2.01
HDAC10-219	ENST00000497483	MED24	O75448	989 aa		27.57	■■■□□ 2
HDAC10-219	ENST00000497483	OFD1	O75665	1012 aa		27.57	■■■□□ 2
HDAC10-219	ENST00000497483	RPA1	P27694	616 aa		27.57	■■■□□ 2
HDAC10-219	ENST00000497483	TEC	P42680	631 aa		27.57	■■■□□ 2
HDAC10-219	ENST00000497483	ALDH7A1	P49419	539 aa	Known RBP	27.57	■■■□□ 2
HDAC10-219	ENST00000497483	BCAR1	P56945	870 aa		27.57	■■■□□ 2
HDAC10-219	ENST00000497483	PLPP4	Q5VZY2	271 aa		27.57	■■■□□ 2
HDAC10-219	ENST00000497483	KHSRP	Q92945	711 aa	Known RBP eCLIP	27.57	■■■□□ 2
HDAC10-219	ENST00000497483	CCDC51	Q96ER9	411 aa		27.57	■■■□□ 2
HDAC10-219	ENST00000497483	ENTPD7	Q9NQZ7	604 aa		27.57	■■■□□ 2
HDAC10-219	ENST00000497483	KIF3A	Q9Y496	699 aa		27.57	■■■□□ 2
HDAC10-219	ENST00000497483	C19orf67	A6NJJ6	358 aa		27.56	■■■□□ 2
HDAC10-219	ENST00000497483	TSPAN1	O60635	241 aa		27.56	■■■□□ 2
HDAC10-219	ENST00000497483	USO1	O60763	962 aa	Known RBP	27.56	■■■□□ 2
HDAC10-219	ENST00000497483	MUT	P22033	750 aa		27.56	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms