RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 MBD6Q96DN6 1003 aa6.36□□□□□ -1.39
VPS36-206ENST00000497149 RTFDC1Q9BY42 306 aaPredicted RBP6.36□□□□□ -1.39
VPS36-206ENST00000497149 ACE2Q9BYF1 805 aaPredicted RBP6.36□□□□□ -1.39
VPS36-206ENST00000497149 RHOBTB2Q9BYZ6 727 aa6.36□□□□□ -1.39
VPS36-206ENST00000497149 LUC7LQ9NQ29 371 aaKnown RBP6.36□□□□□ -1.39
VPS36-206ENST00000497149 MROH6A6NGR9 719 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 MARCH6O60337 910 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 NDUFS2O75306 463 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 FSBPO95073 299 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 ZNF888P0CJ79 500 aaPredicted RBP6.35□□□□□ -1.39
VPS36-206ENST00000497149 HNRNPLP14866 589 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS36-206ENST00000497149 C5AR1P21730 350 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 CFPP27918 469 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 MRE11P49959 708 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 MEOX1P50221 254 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 SESN2P58004 480 aaPredicted RBP6.35□□□□□ -1.39
VPS36-206ENST00000497149 CCT2P78371 535 aaKnown RBP6.35□□□□□ -1.39
VPS36-206ENST00000497149 USP10Q14694 798 aaKnown RBP6.35□□□□□ -1.39
VPS36-206ENST00000497149 PCOLCEQ15113 449 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 PPP2R5AQ15172 486 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 LRRC41Q15345 812 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 ADRM1Q16186 407 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 ZNF827Q17R98 1081 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 LMBR1LQ6UX01 489 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 GLB1L2Q8IW92 636 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 CMTR2Q8IYT2 770 aaKnown RBP6.35□□□□□ -1.39
VPS36-206ENST00000497149 JPH3Q8WXH2 748 aaPredicted RBP6.35□□□□□ -1.39
VPS36-206ENST00000497149 TOX2Q96NM4 488 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 CHPF2Q9P2E5 772 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 ANKRD6Q9Y2G4 727 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 PTPN22Q9Y2R2 807 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 GIT1Q9Y2X7 761 aa6.35□□□□□ -1.39
VPS36-206ENST00000497149 DAPK3O43293 454 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 TSPAN6O43657 245 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 RFPL1O75677 317 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 ZRANB2O95218 330 aaKnown RBP eCLIP6.34□□□□□ -1.39
VPS36-206ENST00000497149 LY86O95711 162 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 KCNC1P48547 511 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 MGAT5Q09328 741 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 KIAA2012Q0VF49 1180 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 ADAM15Q13444 863 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 BTNL9Q6UXG8 535 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 GPR155Q7Z3F1 870 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 LRRC56Q8IYG6 542 aaPredicted RBP6.34□□□□□ -1.39
VPS36-206ENST00000497149 CHPFQ8IZ52 775 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 PPM1NQ8N819 430 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 TUBD1Q9UJT1 453 aa6.34□□□□□ -1.39
VPS36-206ENST00000497149 A0A1W2PR48 441 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 NOBOXO60393 691 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 SCGB1D2O95969 90 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 GAAP10253 952 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 PF4V1P10720 104 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 RRADP55042 308 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 MALLQ13021 153 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 ZMAT1Q5H9K5 638 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 MUM1L1Q5H9M0 696 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 SPOCD1Q6ZMY3 1216 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 CLEC14AQ86T13 490 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 FAM124AQ86V42 546 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 GLB1L3Q8NCI6 653 aaPredicted RBP6.33□□□□□ -1.4
VPS36-206ENST00000497149 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS36-206ENST00000497149 TSR2Q969E8 191 aaKnown RBP6.33□□□□□ -1.4
VPS36-206ENST00000497149 HSPBAP1Q96EW2 488 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 PAWRQ96IZ0 340 aaKnown RBP6.33□□□□□ -1.4
VPS36-206ENST00000497149 KIAA1683Q9H0B3 1180 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 SCOCQ9UIL1 159 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 FAM184BQ9ULE4 1060 aa6.33□□□□□ -1.4
VPS36-206ENST00000497149 CTDP1Q9Y5B0 961 aaPredicted RBP6.33□□□□□ -1.4
VPS36-206ENST00000497149 C2orf78A6NCI8 922 aa6.32□□□□□ -1.4
VPS36-206ENST00000497149 CT47B1P0C2W7 299 aaPredicted RBP6.32□□□□□ -1.4
VPS36-206ENST00000497149 ADKP55263 362 aaKnown RBP6.32□□□□□ -1.4
VPS36-206ENST00000497149 FBLN7Q53RD9 439 aa6.32□□□□□ -1.4
VPS36-206ENST00000497149 AGBL4Q5VU57 503 aa6.32□□□□□ -1.4
VPS36-206ENST00000497149 USP30Q70CQ3 517 aa6.32□□□□□ -1.4
VPS36-206ENST00000497149 RALYLQ86SE5 291 aaKnown RBP6.32□□□□□ -1.4
VPS36-206ENST00000497149 C1QL4Q86Z23 238 aa6.32□□□□□ -1.4
VPS36-206ENST00000497149 KBTBD2Q8IY47 623 aa6.32□□□□□ -1.4
VPS36-206ENST00000497149 UNC5BQ8IZJ1 945 aa6.32□□□□□ -1.4
VPS36-206ENST00000497149 UIMC1Q96RL1 719 aa6.32□□□□□ -1.4
VPS36-206ENST00000497149 OR10A2Q9H208 303 aa6.32□□□□□ -1.4
VPS36-206ENST00000497149 GREM2Q9H772 168 aa6.32□□□□□ -1.4
VPS36-206ENST00000497149 ZBTB21Q9ULJ3 1066 aa6.32□□□□□ -1.4
VPS36-206ENST00000497149 B4GALT4O60513 344 aa6.31□□□□□ -1.4
VPS36-206ENST00000497149 IL33O95760 270 aa6.31□□□□□ -1.4
VPS36-206ENST00000497149 LTA4HP09960 611 aaKnown RBP6.31□□□□□ -1.4
VPS36-206ENST00000497149 GSPT1P15170 499 aaKnown RBP6.31□□□□□ -1.4
VPS36-206ENST00000497149 VCAM1P19320 739 aa6.31□□□□□ -1.4
VPS36-206ENST00000497149 MCAMP43121 646 aa6.31□□□□□ -1.4
VPS36-206ENST00000497149 GJA9P57773 515 aa6.31□□□□□ -1.4
VPS36-206ENST00000497149 MEF2AQ02078 507 aaPredicted RBP6.31□□□□□ -1.4
VPS36-206ENST00000497149 UBE3CQ15386 1083 aa6.31□□□□□ -1.4
VPS36-206ENST00000497149 TBR1Q16650 682 aa6.31□□□□□ -1.4
VPS36-206ENST00000497149 TAS1R1Q7RTX1 841 aa6.31□□□□□ -1.4
VPS36-206ENST00000497149 THEMISQ8N1K5 641 aaPredicted RBP6.31□□□□□ -1.4
VPS36-206ENST00000497149 PLA2G15Q8NCC3 412 aa6.31□□□□□ -1.4
VPS36-206ENST00000497149 PIK3C3Q8NEB9 887 aa6.31□□□□□ -1.4
VPS36-206ENST00000497149 ZSCAN18Q8TBC5 510 aaPredicted RBP6.31□□□□□ -1.4
VPS36-206ENST00000497149 GCDHQ92947 438 aaPredicted RBP6.31□□□□□ -1.4
VPS36-206ENST00000497149 LPPQ93052 612 aa6.31□□□□□ -1.4
VPS36-206ENST00000497149 COA7Q96BR5 231 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms