RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 HPS3Q969F9 1004 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 ERP27Q96DN0 273 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 OLFM3Q96PB7 478 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 PITPNM3Q9BZ71 974 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 MMADHCQ9H3L0 296 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-215ENST00000497139 DENND2DQ9H6A0 471 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-215ENST00000497139 CCDC87Q9NVE4 849 aa13.97□□□□□ -0.17
VEGFA-215ENST00000497139 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.97□□□□□ -0.17
VEGFA-215ENST00000497139 TRAF5O00463 557 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 MYBL1P10243 752 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 ALAS1P13196 640 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 TPP2P29144 1249 aaPredicted RBP13.96□□□□□ -0.17
VEGFA-215ENST00000497139 SLCO1A2P46721 670 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 INF2Q27J81 1249 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 RGS9BPQ6ZS82 235 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 KRT25Q7Z3Z0 450 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 PHC3Q8NDX5 983 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 MGARPQ8TDB4 240 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 IWS1Q96ST2 819 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 CENPKQ9BS16 269 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 DDX43Q9NXZ2 648 aaKnown RBP13.96□□□□□ -0.17
VEGFA-215ENST00000497139 ARMCX3Q9UH62 379 aaPredicted RBP13.96□□□□□ -0.17
VEGFA-215ENST00000497139 LGALS13Q9UHV8 139 aa13.96□□□□□ -0.17
VEGFA-215ENST00000497139 PAPPAQ13219 1627 aa13.96□□□□□ -0.18
VEGFA-215ENST00000497139 RPL21P46778 160 aaKnown RBP13.96□□□□□ -0.18
VEGFA-215ENST00000497139 SERPINB4P48594 390 aa13.96□□□□□ -0.18
VEGFA-215ENST00000497139 IL9RQ01113 521 aa13.96□□□□□ -0.18
VEGFA-215ENST00000497139 DBN1Q16643 649 aa13.96□□□□□ -0.18
VEGFA-215ENST00000497139 SOGA3Q5TF21 947 aa13.96□□□□□ -0.18
VEGFA-215ENST00000497139 HOMEZQ8IX15 550 aa13.96□□□□□ -0.18
VEGFA-215ENST00000497139 SUPT20HQ8NEM7 779 aa13.96□□□□□ -0.18
VEGFA-215ENST00000497139 RFFLQ8WZ73 363 aa13.96□□□□□ -0.18
VEGFA-215ENST00000497139 TUBB6Q9BUF5 446 aa13.96□□□□□ -0.18
VEGFA-215ENST00000497139 SPATA16Q9BXB7 569 aa13.96□□□□□ -0.18
VEGFA-215ENST00000497139 PCDHA3Q9Y5H8 950 aa13.96□□□□□ -0.18
VEGFA-215ENST00000497139 PFASO15067 1338 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 CETN3O15182 167 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 CCDC166P0CW27 439 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 DESP17661 470 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 TAC1P20366 129 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 SLC34A1Q06495 639 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 AP1B1Q10567 949 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 LSAMPQ13449 338 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 C7orf43Q8WVR3 580 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 KIAA1683Q9H0B3 1180 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 BLOC1S4Q9NUP1 217 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 ZNF212Q9UDV6 495 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 HAO1Q9UJM8 370 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 COL1A1P02452 1464 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-215ENST00000497139 C10orf71Q711Q0 1435 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 FGFR4P22455 802 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 TARSP26639 723 aaKnown RBP13.95□□□□□ -0.18
VEGFA-215ENST00000497139 CTSWP56202 376 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 PPATQ06203 517 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 USP4Q13107 963 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 GIT2Q14161 759 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 CNPY1Q3B7I2 92 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 DCAF12L1Q5VU92 463 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 C4orf50Q6ZRC1 276 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 SCG3Q8WXD2 468 aaKnown RBP13.95□□□□□ -0.18
VEGFA-215ENST00000497139 CTNNBL1Q8WYA6 563 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-215ENST00000497139 GLG1Q92896 1179 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 RBM17Q96I25 401 aaKnown RBP13.95□□□□□ -0.18
VEGFA-215ENST00000497139 ZCWPW1Q9H0M4 648 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 KCNK9Q9NPC2 374 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 CHKBQ9Y259 395 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 NR2E1Q9Y466 385 aa13.95□□□□□ -0.18
VEGFA-215ENST00000497139 STRCP1A6NGW2 1772 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 MIF4GDA9UHW6 222 aaKnown RBP13.94□□□□□ -0.18
VEGFA-215ENST00000497139 SMAPO00193 183 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 TMEM253P0C7T8 217 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 BRAFP15056 766 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 CTNNA2P26232 953 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 RNASELQ05823 741 aaKnown RBP13.94□□□□□ -0.18
VEGFA-215ENST00000497139 GRB10Q13322 594 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 RRP1BQ14684 758 aaKnown RBP13.94□□□□□ -0.18
VEGFA-215ENST00000497139 ENOX2Q16206 610 aaKnown RBP13.94□□□□□ -0.18
VEGFA-215ENST00000497139 LRRC74BQ6ZQY2 392 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 ZC3H18Q86VM9 953 aaKnown RBP13.94□□□□□ -0.18
VEGFA-215ENST00000497139 GREM2Q9H772 168 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 GALNT8Q9NY28 637 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 KCPQ6ZWJ8 1503 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 CYP27B1O15528 508 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 UCHL3P15374 230 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 EPHB2P29323 1055 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 MCL1Q07820 350 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 MOGSQ13724 837 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 RASIP1Q5U651 963 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 DAB2IPQ5VWQ8 1189 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 ANKRD42Q8N9B4 389 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 TTC8Q8TAM2 541 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 ZNF398Q8TD17 642 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 RAD54LQ92698 747 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 FAM89AQ96GI7 184 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 NLRP3Q96P20 1036 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 PPP1R12CQ9BZL4 782 aa13.94□□□□□ -0.18
VEGFA-215ENST00000497139 STX18Q9P2W9 335 aaKnown RBP13.94□□□□□ -0.18
VEGFA-215ENST00000497139 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.94□□□□□ -0.183e-16■□□□□ 9.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms