RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 CRIPAKQ8N1N5 446 aa21.3■■□□□ 1
CTDSP1-213ENST00000496785 DEPTORQ8TB45 409 aa21.3■■□□□ 1
CTDSP1-213ENST00000496785 ZNF689Q96CS4 500 aaPredicted RBP21.3■■□□□ 1
CTDSP1-213ENST00000496785 CCDC51Q96ER9 411 aa21.3■■□□□ 1
CTDSP1-213ENST00000496785 PLIN2Q99541 437 aa21.3■■□□□ 1
CTDSP1-213ENST00000496785 CDX2Q99626 313 aaPredicted RBP21.3■■□□□ 1
CTDSP1-213ENST00000496785 EOMESO95936 686 aa21.29■■□□□ 1
CTDSP1-213ENST00000496785 PLCG1P19174 1290 aa21.29■■□□□ 1
CTDSP1-213ENST00000496785 ERVK-21P61565 698 aa21.29■■□□□ 1
CTDSP1-213ENST00000496785 PKP1Q13835 747 aa21.29■■□□□ 1
CTDSP1-213ENST00000496785 GRIN2CQ14957 1233 aa21.29■■□□□ 1
CTDSP1-213ENST00000496785 KARSQ15046 597 aaKnown RBP21.29■■□□□ 1
CTDSP1-213ENST00000496785 CDCA2Q69YH5 1023 aaPredicted RBP21.29■■□□□ 1
CTDSP1-213ENST00000496785 ECHDC2Q86YB7 292 aa21.29■■□□□ 1
CTDSP1-213ENST00000496785 SYMPKQ92797 1274 aaKnown RBP21.29■■□□□ 1
CTDSP1-213ENST00000496785 PRIMPOLQ96LW4 560 aa21.29■■□□□ 1
CTDSP1-213ENST00000496785 GUCD1Q96NT3 240 aa21.29■■□□□ 1
CTDSP1-213ENST00000496785 MINDY3Q9H8M7 445 aa21.29■■□□□ 1
CTDSP1-213ENST00000496785 RC3H2Q9HBD1 1191 aaKnown RBP21.29■■□□□ 1
CTDSP1-213ENST00000496785 PRMT7Q9NVM4 692 aaPredicted RBP21.29■■□□□ 1
CTDSP1-213ENST00000496785 TFIP11Q9UBB9 837 aaKnown RBP21.29■■□□□ 1
CTDSP1-213ENST00000496785 STK17AQ9UEE5 414 aa21.29■■□□□ 1
CTDSP1-213ENST00000496785 STXBP5LQ9Y2K9 1186 aa21.29■■□□□ 1
CTDSP1-213ENST00000496785 IBSPP21815 317 aaPredicted RBP21.28■■□□□ 1
CTDSP1-213ENST00000496785 EFNA5P52803 228 aa21.28■■□□□ 1
CTDSP1-213ENST00000496785 MBTD1Q05BQ5 628 aa21.28■■□□□ 1
CTDSP1-213ENST00000496785 NOTUMQ6P988 496 aa21.28■■□□□ 1
CTDSP1-213ENST00000496785 C1orf186Q6ZWK4 172 aa21.28■■□□□ 1
CTDSP1-213ENST00000496785 ABI1Q8IZP0 508 aa21.28■■□□□ 1
CTDSP1-213ENST00000496785 PRDM12Q9H4Q4 367 aa21.28■■□□□ 1
CTDSP1-213ENST00000496785 LAMA2P24043 3122 aaKnown RBP21.27■■□□□ 1
CTDSP1-213ENST00000496785 CUTAO60888 179 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 HIP1RO75146 1068 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 FOSL2P15408 326 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 SLC12A3P55017 1021 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 DMP1Q13316 513 aaPredicted RBP21.27■■□□□ 1
CTDSP1-213ENST00000496785 MAPK6Q16659 721 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 PPP4R3CPQ6ZMV5 832 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 CCDC73Q6ZRK6 1079 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 CNNM3Q8NE01 707 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 ARNTL2Q8WYA1 636 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 LARP4BQ92615 738 aaKnown RBP21.27■■□□□ 1
CTDSP1-213ENST00000496785 RAD54LQ92698 747 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 PGBD4Q96DM1 585 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 EPSTI1Q96J88 318 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 CLIC6Q96NY7 704 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 RUSC1Q9BVN2 902 aa21.27■■□□□ 1
CTDSP1-213ENST00000496785 RBAK-RBAKDNI3L0D1 243 aa21.26■□□□□ 0.99
CTDSP1-213ENST00000496785 TSPAN1O60635 241 aa21.26■□□□□ 0.99
CTDSP1-213ENST00000496785 FAM187BQ17R55 369 aa21.26■□□□□ 0.99
CTDSP1-213ENST00000496785 FOXD4L6Q3SYB3 417 aaPredicted RBP21.26■□□□□ 0.99
CTDSP1-213ENST00000496785 RRAGBQ5VZM2 374 aa21.26■□□□□ 0.99
CTDSP1-213ENST00000496785 FOXD4L3Q6VB84 417 aaPredicted RBP21.26■□□□□ 0.99
CTDSP1-213ENST00000496785 MYLIPQ8WY64 445 aa21.26■□□□□ 0.99
CTDSP1-213ENST00000496785 TMEM117Q9H0C3 514 aa21.26■□□□□ 0.99
CTDSP1-213ENST00000496785 FAM105AQ9NUU6 356 aa21.26■□□□□ 0.99
CTDSP1-213ENST00000496785 ODF2LQ9ULJ1 636 aa21.26■□□□□ 0.99
CTDSP1-213ENST00000496785 RBM19Q9Y4C8 960 aaKnown RBP21.26■□□□□ 0.99
CTDSP1-213ENST00000496785 ZNF623O75123 536 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 ARHGEF15O94989 841 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 DDIT3P35638 169 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 SMTNP53814 917 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 KRT85P78386 507 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 NUCB2P80303 420 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 SPECC1Q5M775 1068 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 GPBP1Q86WP2 473 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 HACE1Q8IYU2 909 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 RNF169Q8NCN4 708 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 FBXO22Q8NEZ5 403 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 BSNDQ8WZ55 320 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 BLOC1S4Q9NUP1 217 aa21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 LARSQ9P2J5 1176 aaKnown RBP21.25■□□□□ 0.99
CTDSP1-213ENST00000496785 CCDC169A6NNP5 214 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 TBKBP1A7MCY6 615 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 H0YCG3 227 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 GTPBP6O43824 516 aaPredicted RBP21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 KRT18P05783 430 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 RB1P06400 928 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 SCP2P22307 547 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 HOXA11P31270 313 aaPredicted RBP21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 ME1P48163 572 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 DNM1Q05193 864 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 TMEM132AQ24JP5 1023 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 USP49Q70CQ1 688 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 ZNF598Q86UK7 904 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 TMEM192Q8IY95 271 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 CLP1Q92989 425 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 MRPL9Q9BYD2 267 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 TRIM6Q9C030 488 aaPredicted RBP21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 FZD8Q9H461 694 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 CERS4Q9HA82 394 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 KMT5AQ9NQR1 393 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 AAASQ9NRG9 546 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 CNTNAP2Q9UHC6 1331 aa21.24■□□□□ 0.99
CTDSP1-213ENST00000496785 CARNS1A5YM72 827 aa21.23■□□□□ 0.99
CTDSP1-213ENST00000496785 PRKCBP05771 671 aa21.23■□□□□ 0.99
CTDSP1-213ENST00000496785 PLS3P13797 630 aa21.23■□□□□ 0.99
CTDSP1-213ENST00000496785 ARF4P18085 180 aaPredicted RBP21.23■□□□□ 0.99
CTDSP1-213ENST00000496785 NCLP19338 710 aaKnown RBP21.23■□□□□ 0.99
CTDSP1-213ENST00000496785 CTNNB1P35222 781 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms