RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 IFNLR1Q8IU57 520 aaPredicted RBP20.34■□□□□ 0.85
COPS6-210ENST00000496358 CLP1Q92989 425 aaKnown RBP20.34■□□□□ 0.85
COPS6-210ENST00000496358 NT5C3AQ9H0P0 336 aa20.34■□□□□ 0.85
COPS6-210ENST00000496358 MTCH2Q9Y6C9 303 aa20.34■□□□□ 0.85
COPS6-210ENST00000496358 MRPL42Q9Y6G3 142 aaKnown RBP20.34■□□□□ 0.85
COPS6-210ENST00000496358 EOMESO95936 686 aa20.33■□□□□ 0.85
COPS6-210ENST00000496358 SKIP12755 728 aa20.33■□□□□ 0.85
COPS6-210ENST00000496358 PDIA4P13667 645 aaKnown RBP20.33■□□□□ 0.85
COPS6-210ENST00000496358 LONP1P36776 959 aaKnown RBP20.33■□□□□ 0.85
COPS6-210ENST00000496358 UBA7P41226 1012 aa20.33■□□□□ 0.85
COPS6-210ENST00000496358 HYIQ5T013 277 aa20.33■□□□□ 0.85
COPS6-210ENST00000496358 ABI1Q8IZP0 508 aa20.33■□□□□ 0.85
COPS6-210ENST00000496358 KCTD17Q8N5Z5 321 aa20.33■□□□□ 0.85
COPS6-210ENST00000496358 PNMA5Q96PV4 448 aa20.33■□□□□ 0.85
COPS6-210ENST00000496358 PLIN2Q99541 437 aa20.33■□□□□ 0.85
COPS6-210ENST00000496358 TRAIPQ9BWF2 469 aa20.33■□□□□ 0.85
COPS6-210ENST00000496358 NFKBIZQ9BYH8 718 aa20.33■□□□□ 0.85
COPS6-210ENST00000496358 H3BNC9 293 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 RB1P06400 928 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 LINC00271P0C7V0 271 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 RAB27AP51159 221 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 MBTD1Q05BQ5 628 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 PTPAQ15257 358 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 SPOUT1Q5T280 376 aaKnown RBP20.32■□□□□ 0.84
COPS6-210ENST00000496358 KCNK18Q7Z418 384 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 ZBTB8OSQ8IWT0 167 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 CALML4Q96GE6 196 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 TMEM117Q9H0C3 514 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 POLD4Q9HCU8 107 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 FAM105AQ9NUU6 356 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 LMCD1Q9NZU5 365 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 MYH11P35749 1972 aa20.32■□□□□ 0.84
COPS6-210ENST00000496358 C5orf67F2Z3F1 127 aa20.31■□□□□ 0.84
COPS6-210ENST00000496358 SLC26A4O43511 780 aa20.31■□□□□ 0.84
COPS6-210ENST00000496358 SSBP05455 408 aaKnown RBP eCLIP20.31■□□□□ 0.84
COPS6-210ENST00000496358 MARCKSP29966 332 aaPredicted RBP20.31■□□□□ 0.84
COPS6-210ENST00000496358 AXLP30530 894 aa20.31■□□□□ 0.84
COPS6-210ENST00000496358 HOXA11P31270 313 aaPredicted RBP20.31■□□□□ 0.84
COPS6-210ENST00000496358 GRIN1Q05586 938 aa20.31■□□□□ 0.84
COPS6-210ENST00000496358 PPP2R5AQ15172 486 aa20.31■□□□□ 0.84
COPS6-210ENST00000496358 FOXD4L5Q5VV16 416 aaPredicted RBP20.31■□□□□ 0.84
COPS6-210ENST00000496358 ZNF598Q86UK7 904 aaKnown RBP20.31■□□□□ 0.84
COPS6-210ENST00000496358 FOXD4L4Q8WXT5 416 aaPredicted RBP20.31■□□□□ 0.84
COPS6-210ENST00000496358 KIFAP3Q92845 792 aa20.31■□□□□ 0.84
COPS6-210ENST00000496358 IFT74Q96LB3 600 aa20.31■□□□□ 0.84
COPS6-210ENST00000496358 USP28Q96RU2 1077 aa20.31■□□□□ 0.84
COPS6-210ENST00000496358 C11orf84Q9BUA3 381 aaPredicted RBP20.31■□□□□ 0.84
COPS6-210ENST00000496358 TSPAN1O60635 241 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 ATF7P17544 494 aaPredicted RBP20.3■□□□□ 0.84
COPS6-210ENST00000496358 NAMPTP43490 491 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 LONRF3Q496Y0 759 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 RINT1Q6NUQ1 792 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 NOTUMQ6P988 496 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 RASSF8Q8NHQ8 419 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 DEPTORQ8TB45 409 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 HELQQ8TDG4 1101 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 BSNDQ8WZ55 320 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 CPB2Q96IY4 423 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 CASD1Q96PB1 797 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 PLVAPQ9BX97 442 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 C2orf40Q9H1Z8 148 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 RNF19AQ9NV58 838 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 TYW1Q9NV66 732 aaKnown RBP20.3■□□□□ 0.84
COPS6-210ENST00000496358 PCDHB2Q9Y5E7 798 aa20.3■□□□□ 0.84
COPS6-210ENST00000496358 ZNF623O75123 536 aa20.29■□□□□ 0.84
COPS6-210ENST00000496358 PTPROQ16827 1216 aa20.29■□□□□ 0.84
COPS6-210ENST00000496358 TMEM119Q4V9L6 283 aa20.29■□□□□ 0.84
COPS6-210ENST00000496358 CLLU1OSQ5K130 101 aa20.29■□□□□ 0.84
COPS6-210ENST00000496358 CDCA2Q69YH5 1023 aaPredicted RBP20.29■□□□□ 0.84
COPS6-210ENST00000496358 C1orf186Q6ZWK4 172 aa20.29■□□□□ 0.84
COPS6-210ENST00000496358 LPPQ93052 612 aa20.29■□□□□ 0.84
COPS6-210ENST00000496358 PGBD4Q96DM1 585 aa20.29■□□□□ 0.84
COPS6-210ENST00000496358 ZNF396Q96N95 335 aaPredicted RBP20.29■□□□□ 0.84
COPS6-210ENST00000496358 RUSC1Q9BVN2 902 aa20.29■□□□□ 0.84
COPS6-210ENST00000496358 CSRNP2Q9H175 543 aa20.29■□□□□ 0.84
COPS6-210ENST00000496358 AAASQ9NRG9 546 aa20.29■□□□□ 0.84
COPS6-210ENST00000496358 PRMT7Q9NVM4 692 aaPredicted RBP20.29■□□□□ 0.84
COPS6-210ENST00000496358 SRPRBQ9Y5M8 271 aaKnown RBP20.29■□□□□ 0.84
COPS6-210ENST00000496358 HIP1RO75146 1068 aa20.28■□□□□ 0.84
COPS6-210ENST00000496358 PLA2G4BP0C869 781 aa20.28■□□□□ 0.84
COPS6-210ENST00000496358 ZSCAN22P10073 491 aaPredicted RBP20.28■□□□□ 0.84
COPS6-210ENST00000496358 ARF4P18085 180 aaPredicted RBP20.28■□□□□ 0.84
COPS6-210ENST00000496358 SLC39A14Q15043 492 aa20.28■□□□□ 0.84
COPS6-210ENST00000496358 AMHR2Q16671 573 aa20.28■□□□□ 0.84
COPS6-210ENST00000496358 UBXN11Q5T124 520 aa20.28■□□□□ 0.84
COPS6-210ENST00000496358 SYT2Q8N9I0 419 aaPredicted RBP20.28■□□□□ 0.84
COPS6-210ENST00000496358 P2RX5Q93086 422 aa20.28■□□□□ 0.84
COPS6-210ENST00000496358 MRPL38Q96DV4 380 aaKnown RBP20.28■□□□□ 0.84
COPS6-210ENST00000496358 CCDC51Q96ER9 411 aa20.28■□□□□ 0.84
COPS6-210ENST00000496358 FBXO2Q9UK22 296 aaPredicted RBP20.28■□□□□ 0.84
COPS6-210ENST00000496358 PCDHB12Q9Y5F1 795 aa20.28■□□□□ 0.84
COPS6-210ENST00000496358 SPTBN5Q9NRC6 3674 aaKnown RBP20.28■□□□□ 0.84
COPS6-210ENST00000496358 EYSQ5T1H1 3165 aa20.27■□□□□ 0.84
COPS6-210ENST00000496358 KARSQ15046 597 aaKnown RBP20.27■□□□□ 0.84
COPS6-210ENST00000496358 STK38Q15208 465 aa20.27■□□□□ 0.84
COPS6-210ENST00000496358 SKIV2LQ15477 1246 aaKnown RBP20.27■□□□□ 0.84
COPS6-210ENST00000496358 NAALADL2Q58DX5 795 aa20.27■□□□□ 0.84
COPS6-210ENST00000496358 SPECC1Q5M775 1068 aa20.27■□□□□ 0.84
COPS6-210ENST00000496358 LRRC43Q8N309 656 aa20.27■□□□□ 0.84
COPS6-210ENST00000496358 CNNM3Q8NE01 707 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms