RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.17□□□□□ -0.3
THBS3-208ENST00000496332 ASAP3Q8TDY4 903 aa13.17□□□□□ -0.3
THBS3-208ENST00000496332 LPPQ93052 612 aa13.17□□□□□ -0.3
THBS3-208ENST00000496332 NACC1Q96RE7 527 aa13.17□□□□□ -0.3
THBS3-208ENST00000496332 IGFLR1Q9H665 355 aa13.17□□□□□ -0.3
THBS3-208ENST00000496332 FAM105AQ9NUU6 356 aa13.17□□□□□ -0.3
THBS3-208ENST00000496332 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
THBS3-208ENST00000496332 USO1O60763 962 aaKnown RBP13.16□□□□□ -0.3
THBS3-208ENST00000496332 ZNF623O75123 536 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 RPA1P27694 616 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 HOXA11P31270 313 aaPredicted RBP13.16□□□□□ -0.3
THBS3-208ENST00000496332 GTF2F1P35269 517 aaKnown RBP eCLIP13.16□□□□□ -0.3
THBS3-208ENST00000496332 PBX3P40426 434 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
THBS3-208ENST00000496332 RAB27AP51159 221 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 PTENP60484 403 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 PTGDRQ13258 359 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 CAPSQ13938 189 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 CTC1Q2NKJ3 1217 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 MCTP1Q6DN14 999 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 POTEGQ6S5H5 508 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 KCNT2Q6UVM3 1135 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 ADGRD2Q7Z7M1 963 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 MICAL1Q8TDZ2 1067 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 PPP2R3CQ969Q6 453 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 ZNF558Q96NG5 402 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 LRWD1Q9UFC0 647 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 DBR1Q9UK59 544 aaKnown RBP13.16□□□□□ -0.3
THBS3-208ENST00000496332 PCDHB2Q9Y5E7 798 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 PCDHGC5Q9Y5F6 944 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 FNDC1Q4ZHG4 1894 aaPredicted RBP13.16□□□□□ -0.3
THBS3-208ENST00000496332 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
THBS3-208ENST00000496332 MEIS3P2A8K0S8 358 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 H3BQV1 296 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 INO80B-WBP1J3KQ70 363 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 ERLIN2O94905 339 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 GLRA2P23416 452 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 LTBRP36941 435 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 ERVFC1P60507 584 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 PLCB3Q01970 1234 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 POU5F1BQ06416 359 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 PDIA5Q14554 519 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 UBXN11Q5T124 520 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 HAUS3Q68CZ6 603 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 PTCRAQ6ISU1 281 aaPredicted RBP13.15□□□□□ -0.3
THBS3-208ENST00000496332 GLB1LQ6UWU2 654 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 RBM23Q86U06 439 aaKnown RBP13.15□□□□□ -0.3
THBS3-208ENST00000496332 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
THBS3-208ENST00000496332 PGBD4Q96DM1 585 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 MRPL9Q9BYD2 267 aaKnown RBP13.15□□□□□ -0.3
THBS3-208ENST00000496332 POLR3FQ9H1D9 316 aaPredicted RBP13.15□□□□□ -0.3
THBS3-208ENST00000496332 GPRC5CQ9NQ84 441 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 TLR9Q9NR96 1032 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
THBS3-208ENST00000496332 SMC3Q9UQE7 1217 aa13.15□□□□□ -0.3
THBS3-208ENST00000496332 BDP1A6H8Y1 2624 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 GRXCR2A6NFK2 248 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 LINC01565O15544 149 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 TSPAN1O60635 241 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 OFD1O75665 1012 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 MUTP22033 750 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 PPM1AP35813 382 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 CCT6AP40227 531 aaKnown RBP13.14□□□□□ -0.31
THBS3-208ENST00000496332 NRIP1P48552 1158 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 KRT17Q04695 432 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 MBTD1Q05BQ5 628 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 DLX2Q07687 328 aaPredicted RBP13.14□□□□□ -0.31
THBS3-208ENST00000496332 NCBP1Q09161 790 aaKnown RBP13.14□□□□□ -0.31
THBS3-208ENST00000496332 ADAM15Q13444 863 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 PCBP1Q15365 356 aaKnown RBP eCLIP13.14□□□□□ -0.31
THBS3-208ENST00000496332 ECM1Q16610 540 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 PUS10Q3MIT2 529 aaKnown RBP13.14□□□□□ -0.31
THBS3-208ENST00000496332 NOMO2Q5JPE7 1267 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 MRPL10Q7Z7H8 261 aaKnown RBP13.14□□□□□ -0.31
THBS3-208ENST00000496332 MCPH1Q8NEM0 835 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 RSPH1Q8WYR4 309 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 MRPS27Q92552 414 aaKnown RBP13.14□□□□□ -0.31
THBS3-208ENST00000496332 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
THBS3-208ENST00000496332 SPG21Q9NZD8 308 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 LZTS1Q9Y250 596 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 INPP5FQ9Y2H2 1132 aa13.14□□□□□ -0.31
THBS3-208ENST00000496332 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.14□□□□□ -0.31
THBS3-208ENST00000496332 TCF20Q9UGU0 1960 aaKnown RBP13.14□□□□□ -0.31
THBS3-208ENST00000496332 ARID2Q68CP9 1835 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 ARHGEF35A5YM69 484 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 NT5C1B-RDH14C9J2C7 533 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 LAD1O00515 517 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 FSCN2O14926 492 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 IL9P15248 144 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 AXLP30530 894 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 ALDH7A1P49419 539 aaKnown RBP13.13□□□□□ -0.31
THBS3-208ENST00000496332 BCAR1P56945 870 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 CLUL1Q15846 466 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 IL17AQ16552 155 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 AMHR2Q16671 573 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 RILPL1Q5EBL4 403 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 PDE12Q6L8Q7 609 aaKnown RBP13.13□□□□□ -0.31
THBS3-208ENST00000496332 PADI6Q6TGC4 694 aa13.13□□□□□ -0.31
THBS3-208ENST00000496332 DTHD1Q6ZMT9 781 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms