RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 GINS2Q9Y248 185 aa24.01■■□□□ 1.43
ECHDC3-205ENST00000496136 MKI67P46013 3256 aaKnown RBP24■■□□□ 1.43
ECHDC3-205ENST00000496136 DENND3A2RUS2 1198 aa24■■□□□ 1.43
ECHDC3-205ENST00000496136 H0YCG3 227 aa24■■□□□ 1.43
ECHDC3-205ENST00000496136 PRPF6O94906 941 aaKnown RBP24■■□□□ 1.43
ECHDC3-205ENST00000496136 THPOP40225 353 aa24■■□□□ 1.43
ECHDC3-205ENST00000496136 TLE2Q04725 743 aa24■■□□□ 1.43
ECHDC3-205ENST00000496136 KCNA1Q09470 495 aa24■■□□□ 1.43
ECHDC3-205ENST00000496136 TRIM60Q495X7 471 aa24■■□□□ 1.43
ECHDC3-205ENST00000496136 MYOCDQ8IZQ8 938 aa24■■□□□ 1.43
ECHDC3-205ENST00000496136 ADSSL1Q8N142 457 aa24■■□□□ 1.43
ECHDC3-205ENST00000496136 GUF1Q8N442 669 aaKnown RBP24■■□□□ 1.43
ECHDC3-205ENST00000496136 KCNN1Q92952 543 aa24■■□□□ 1.43
ECHDC3-205ENST00000496136 K7ERI5 159 aa23.99■■□□□ 1.43
ECHDC3-205ENST00000496136 EIF3DO15371 548 aaKnown RBP eCLIP23.99■■□□□ 1.43
ECHDC3-205ENST00000496136 HOXD13P35453 343 aa23.99■■□□□ 1.43
ECHDC3-205ENST00000496136 MRPS6P82932 125 aaKnown RBP23.99■■□□□ 1.43
ECHDC3-205ENST00000496136 ALCAMQ13740 583 aa23.99■■□□□ 1.43
ECHDC3-205ENST00000496136 LRRC26Q2I0M4 334 aa23.99■■□□□ 1.43
ECHDC3-205ENST00000496136 STXBP4Q6ZWJ1 553 aa23.99■■□□□ 1.43
ECHDC3-205ENST00000496136 IFNLR1Q8IU57 520 aaPredicted RBP23.99■■□□□ 1.43
ECHDC3-205ENST00000496136 CELF4Q9BZC1 486 aaKnown RBP23.99■■□□□ 1.43
ECHDC3-205ENST00000496136 DCDC2CA8MYV0 355 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 PHKA2P46019 1235 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 EFNA5P52803 228 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 TAS1R3Q7RTX0 852 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 SCLT1Q96NL6 688 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 DNAJC25Q9H1X3 360 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 TMEM134Q9H6X4 195 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 MINDY3Q9H8M7 445 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 TBX20Q9UMR3 447 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 TLR3O15455 904 aaKnown RBP23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 CSDE1O75534 798 aaKnown RBP23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 CHRNA1P02708 482 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 SCP2P22307 547 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 FAAP100Q0VG06 881 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 BMT2Q1RMZ1 405 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 ANO6Q4KMQ2 910 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 ZBTB8OSQ8IWT0 167 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 OSMRQ99650 979 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 C2orf40Q9H1Z8 148 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 CDY2AQ9Y6F7 541 aa23.98■■□□□ 1.43
ECHDC3-205ENST00000496136 IQCF3P0C7M6 154 aa23.97■■□□□ 1.43
ECHDC3-205ENST00000496136 CKBP12277 381 aa23.97■■□□□ 1.43
ECHDC3-205ENST00000496136 CRYBB1P53674 252 aaPredicted RBP23.97■■□□□ 1.43
ECHDC3-205ENST00000496136 STIM1Q13586 685 aa23.97■■□□□ 1.43
ECHDC3-205ENST00000496136 KLHL10Q6JEL2 608 aa23.97■■□□□ 1.43
ECHDC3-205ENST00000496136 C11orf57Q6ZUT1 292 aaPredicted RBP23.97■■□□□ 1.43
ECHDC3-205ENST00000496136 NELFCDQ8IXH7 590 aa23.97■■□□□ 1.43
ECHDC3-205ENST00000496136 GCOM2Q9BZD3 368 aaPredicted RBP23.97■■□□□ 1.43
ECHDC3-205ENST00000496136 CCDC113Q9H0I3 377 aa23.97■■□□□ 1.43
ECHDC3-205ENST00000496136 ATP11BQ9Y2G3 1177 aa23.97■■□□□ 1.43
ECHDC3-205ENST00000496136 INO80B-WBP1J3KQ70 363 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 M0QZ92 97 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 CAND2O75155 1236 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 KIF20AO95235 890 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 CTSHP09668 335 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 EIF4BP23588 611 aaKnown RBP23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 ABCD1P33897 745 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 PPP1R2P41236 205 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 MBTD1Q05BQ5 628 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 MGAT3Q09327 533 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 KNOP1Q1ED39 458 aaKnown RBP23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 L1TD1Q5T7N2 865 aaKnown RBP23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 ZNF618Q5T7W0 954 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 SRGAP1Q7Z6B7 1085 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 TMEM40Q8WWA1 233 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 DHTKD1Q96HY7 919 aaPredicted RBP23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 INO80BQ9C086 356 aaPredicted RBP23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 FZD8Q9H461 694 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 DACH1Q9UI36 760 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 TRPV2Q9Y5S1 764 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 DARSP14868 501 aaKnown RBP23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 RBL2Q08999 1139 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 MAPK6Q16659 721 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 FAM26DQ5JW98 314 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 CAGE1Q8TC20 777 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 HVCN1Q96D96 273 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 ACCSQ96QU6 501 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 IKZF4Q9H2S9 585 aa23.96■■□□□ 1.43
ECHDC3-205ENST00000496136 PSMA7O14818 248 aa23.95■■□□□ 1.42
ECHDC3-205ENST00000496136 CT47A1Q5JQC4 288 aaPredicted RBP23.95■■□□□ 1.42
ECHDC3-205ENST00000496136 MAP4K3Q8IVH8 894 aa23.95■■□□□ 1.42
ECHDC3-205ENST00000496136 KCTD10Q9H3F6 313 aa23.95■■□□□ 1.42
ECHDC3-205ENST00000496136 SEMA6BQ9H3T3 888 aa23.95■■□□□ 1.42
ECHDC3-205ENST00000496136 TMEM206Q9H813 350 aa23.95■■□□□ 1.42
ECHDC3-205ENST00000496136 UBE4BO95155 1302 aa23.94■■□□□ 1.42
ECHDC3-205ENST00000496136 PHLPP2Q6ZVD8 1323 aa23.94■■□□□ 1.42
ECHDC3-205ENST00000496136 STRN3Q13033 797 aa23.94■■□□□ 1.42
ECHDC3-205ENST00000496136 CENPPQ6IPU0 288 aa23.94■■□□□ 1.42
ECHDC3-205ENST00000496136 MED15Q96RN5 788 aa23.94■■□□□ 1.42
ECHDC3-205ENST00000496136 TSPY26PQ9H489 355 aa23.94■■□□□ 1.42
ECHDC3-205ENST00000496136 USP20Q9Y2K6 914 aa23.94■■□□□ 1.42
ECHDC3-205ENST00000496136 EDN1P05305 212 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 ERCC5P28715 1186 aaPredicted RBP23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 PMS1P54277 932 aaKnown RBP23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 BFSP2Q13515 415 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 TRAF7Q6Q0C0 670 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 NELFBQ8WX92 580 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 SIP14410 1827 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms