RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 NSUN3Q9H649 340 aaKnown RBP18.94■□□□□ 0.62
COMMD3-214ENST00000496071 MINDY3Q9H8M7 445 aa18.94■□□□□ 0.62
COMMD3-214ENST00000496071 FAM105AQ9NUU6 356 aa18.94■□□□□ 0.62
COMMD3-214ENST00000496071 RNF19AQ9NV58 838 aa18.94■□□□□ 0.62
COMMD3-214ENST00000496071 ARHGEF35A5YM69 484 aa18.93■□□□□ 0.62
COMMD3-214ENST00000496071 ERLIN2O94905 339 aa18.93■□□□□ 0.62
COMMD3-214ENST00000496071 ITGB1P05556 798 aa18.93■□□□□ 0.62
COMMD3-214ENST00000496071 AXLP30530 894 aa18.93■□□□□ 0.62
COMMD3-214ENST00000496071 ATP2C1P98194 919 aaPredicted RBP18.93■□□□□ 0.62
COMMD3-214ENST00000496071 KRT79Q5XKE5 535 aa18.93■□□□□ 0.62
COMMD3-214ENST00000496071 LRRC43Q8N309 656 aa18.93■□□□□ 0.62
COMMD3-214ENST00000496071 SPPL3Q8TCT6 385 aa18.93■□□□□ 0.62
COMMD3-214ENST00000496071 PGBD4Q96DM1 585 aa18.93■□□□□ 0.62
COMMD3-214ENST00000496071 MRPL9Q9BYD2 267 aaKnown RBP18.93■□□□□ 0.62
COMMD3-214ENST00000496071 POLR3FQ9H1D9 316 aaPredicted RBP18.93■□□□□ 0.62
COMMD3-214ENST00000496071 CWH43Q9H720 699 aa18.93■□□□□ 0.62
COMMD3-214ENST00000496071 ALG13Q9NP73 1137 aaKnown RBP18.93■□□□□ 0.62
COMMD3-214ENST00000496071 PRUNE2Q8WUY3 3088 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 NCK2O43639 380 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 ATF7P17544 494 aaPredicted RBP18.92■□□□□ 0.62
COMMD3-214ENST00000496071 CYP11B2P19099 503 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 GLRA2P23416 452 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 UBE3AQ05086 875 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 CAPSQ13938 189 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 ARL6IP4Q66PJ3 421 aaKnown RBP18.92■□□□□ 0.62
COMMD3-214ENST00000496071 PADI6Q6TGC4 694 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 BRAPQ7Z569 592 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 COLGALT1Q8NBJ5 622 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 ASAP3Q8TDY4 903 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 SNX29Q8TEQ0 813 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 INTS4Q96HW7 963 aaKnown RBP18.92■□□□□ 0.62
COMMD3-214ENST00000496071 KIAA1024Q9UPX6 916 aa18.92■□□□□ 0.62
COMMD3-214ENST00000496071 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.91■□□□□ 0.62
COMMD3-214ENST00000496071 CARNS1A5YM72 827 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 INO80B-WBP1J3KQ70 363 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 HOXA11P31270 313 aaPredicted RBP18.91■□□□□ 0.62
COMMD3-214ENST00000496071 TCEAL5Q5H9L2 206 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 CLLU1OSQ5K130 101 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 MAEAQ7L5Y9 396 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 KCTD17Q8N5Z5 321 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 CNNM3Q8NE01 707 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 HELQQ8TDG4 1101 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 POF1BQ8WVV4 589 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 PPP2R3CQ969Q6 453 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 CCDC51Q96ER9 411 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 DDX19AQ9NUU7 478 aaKnown RBP18.91■□□□□ 0.62
COMMD3-214ENST00000496071 DNM3Q9UQ16 869 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 PCDHB2Q9Y5E7 798 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 UNC80Q8N2C7 3258 aa18.91■□□□□ 0.62
COMMD3-214ENST00000496071 BMP15O95972 392 aa18.9■□□□□ 0.62
COMMD3-214ENST00000496071 TFF2Q03403 129 aa18.9■□□□□ 0.62
COMMD3-214ENST00000496071 IL17AQ16552 155 aa18.9■□□□□ 0.62
COMMD3-214ENST00000496071 ECM1Q16610 540 aa18.9■□□□□ 0.62
COMMD3-214ENST00000496071 NOTUMQ6P988 496 aa18.9■□□□□ 0.62
COMMD3-214ENST00000496071 GLB1LQ6UWU2 654 aa18.9■□□□□ 0.62
COMMD3-214ENST00000496071 LRRC55Q6ZSA7 311 aa18.9■□□□□ 0.62
COMMD3-214ENST00000496071 MRPL10Q7Z7H8 261 aaKnown RBP18.9■□□□□ 0.62
COMMD3-214ENST00000496071 THNSL1Q8IYQ7 743 aa18.9■□□□□ 0.62
COMMD3-214ENST00000496071 ZNF558Q96NG5 402 aa18.9■□□□□ 0.62
COMMD3-214ENST00000496071 BHMT2Q9H2M3 363 aa18.9■□□□□ 0.62
COMMD3-214ENST00000496071 UBE2ZQ9H832 354 aaPredicted RBP18.9■□□□□ 0.62
COMMD3-214ENST00000496071 PLXNA4Q9HCM2 1894 aa18.9■□□□□ 0.62
COMMD3-214ENST00000496071 LRRIQ4A6NIV6 560 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 K7ELQ4 463 aaPredicted RBP18.89■□□□□ 0.61
COMMD3-214ENST00000496071 TSPAN1O60635 241 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 FGF18O76093 207 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 PPM1AP35813 382 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 PLCB3Q01970 1234 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 MBTD1Q05BQ5 628 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 CAMK1Q14012 370 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 PPP2R5AQ15172 486 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 KCNT2Q6UVM3 1135 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 ZBTB8OSQ8IWT0 167 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 PABPC5Q96DU9 382 aaKnown RBP18.89■□□□□ 0.61
COMMD3-214ENST00000496071 C2orf40Q9H1Z8 148 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 GPRC5CQ9NQ84 441 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 PUF60Q9UHX1 559 aaKnown RBP18.89■□□□□ 0.61
COMMD3-214ENST00000496071 LZTS1Q9Y250 596 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 ATG2AQ2TAZ0 1938 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 CNTNAP2Q9UHC6 1331 aa18.89■□□□□ 0.61
COMMD3-214ENST00000496071 VPS37CA5D8V6 355 aaPredicted RBP18.88■□□□□ 0.61
COMMD3-214ENST00000496071 EYA4O95677 639 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 BMP1P13497 986 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 DNAJB1P25685 340 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 KRT17Q04695 432 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 NOMO2Q5JPE7 1267 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 UBXN11Q5T124 520 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 PDE12Q6L8Q7 609 aaKnown RBP18.88■□□□□ 0.61
COMMD3-214ENST00000496071 KIFAP3Q92845 792 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 LPPQ93052 612 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 PRIMPOLQ96LW4 560 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 NT5C3AQ9H0P0 336 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 CSRNP2Q9H175 543 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 UBN1Q9NPG3 1134 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 HCSTQ9UBK5 93 aa18.88■□□□□ 0.61
COMMD3-214ENST00000496071 DAXXQ9UER7 740 aaPredicted RBP18.88■□□□□ 0.61
COMMD3-214ENST00000496071 VWA3AA6NCI4 1184 aa18.87■□□□□ 0.61
COMMD3-214ENST00000496071 PP2D1A8MPX8 630 aa18.87■□□□□ 0.61
COMMD3-214ENST00000496071 REV3LO60673 3130 aa18.87■□□□□ 0.61
COMMD3-214ENST00000496071 OFD1O75665 1012 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms