RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 MRPL9Q9BYD2 267 aaKnown RBP11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 JMJD4Q9H9V9 463 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 PRMT8Q9NR22 394 aaPredicted RBP11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 RTEL1Q9NZ71 1219 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 NUMBLQ9Y6R0 609 aa11.03□□□□□ -0.64
SMARCAL1-213ENST00000496037 SMIM35A0A1B0GVV1 85 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 CARNS1A5YM72 827 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 SRRM3A6NNA2 597 aaPredicted RBP11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 NT5C1B-RDH14C9J2C7 533 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 NCAM2O15394 837 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 CLCN4P51793 760 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 BCAR1P56945 870 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 FAM189BP81408 668 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 MRPS9P82933 396 aaKnown RBP11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 HTR4Q13639 388 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 PPP2R5DQ14738 602 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 ZBTB41Q5SVQ8 909 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 CYP26C1Q6V0L0 522 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 NYAP1Q6ZVC0 841 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 GET4Q7L5D6 327 aaPredicted RBP11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 RNF169Q8NCN4 708 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 PNMA1Q8ND90 353 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 DDX23Q9BUQ8 820 aaKnown RBP11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 LRRCC1Q9C099 1032 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 KAT14Q9H8E8 782 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 LTB4R2Q9NPC1 389 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 DPP7Q9UHL4 492 aa11.02□□□□□ -0.65
SMARCAL1-213ENST00000496037 ZC3H11AO75152 810 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 PARP1P09874 1014 aaKnown RBP11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 LIMK1P53667 647 aa11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 RSPO2Q6UXX9 243 aaPredicted RBP11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 DDX53Q86TM3 631 aaKnown RBP11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 NLRX1Q86UT6 975 aa11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 TRAPPC12Q8WVT3 735 aa11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 GLMNQ92990 594 aa11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 AZI2Q9H6S1 392 aa11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 MAN1C1Q9NR34 630 aa11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 RNF19AQ9NV58 838 aa11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 TSR3Q9UJK0 312 aaKnown RBP11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 MTF2Q9Y483 593 aaPredicted RBP11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 DOCK5Q9H7D0 1870 aa11.01□□□□□ -0.65
SMARCAL1-213ENST00000496037 IGF2RP11717 2491 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 C2orf16Q68DN1 1984 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 CCDC195A0A1B0GUA6 201 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 ANHXE9PGG2 379 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 TAF4O00268 1085 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 INPPL1O15357 1258 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 FOXP2O15409 715 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 LAMP2P13473 410 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 ZSCAN20P17040 1043 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-213ENST00000496037 GPC5P78333 572 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 PFKPQ01813 784 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 TRAF1Q13077 416 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 SIM2Q14190 667 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-213ENST00000496037 PLCB4Q15147 1175 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 ZMYM1Q5SVZ6 1142 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 TSHZ3Q63HK5 1081 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 DGKHQ86XP1 1220 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 C12orf50Q8NA57 414 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-213ENST00000496037 TMEM40Q8WWA1 233 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 ZCCHC14Q8WYQ9 949 aaKnown RBP11□□□□□ -0.65
SMARCAL1-213ENST00000496037 SMG7Q92540 1137 aaKnown RBP11□□□□□ -0.65
SMARCAL1-213ENST00000496037 PHKBQ93100 1093 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 KLHL5Q96PQ7 755 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 RHOBTB2Q9BYZ6 727 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 PIDD1Q9HB75 910 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 PRM3Q9NNZ6 103 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 FRMPD4Q14CM0 1322 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 DSPP15924 2871 aaKnown RBP11□□□□□ -0.65
SMARCAL1-213ENST00000496037 MAST4O15021 2626 aa11□□□□□ -0.65
SMARCAL1-213ENST00000496037 MYH6P13533 1939 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 GSTTP1A0A1W2PQM5 241 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 ZBTB5O15062 677 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 PCP11498 1178 aaKnown RBP10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 RPS9P46781 194 aaKnown RBP10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 FOXC1Q12948 553 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 WTAPQ15007 396 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 SLC44A4Q53GD3 710 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 CLLU1OSQ5K130 101 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 MTHFD1LQ6UB35 978 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 MFSD6Q6ZSS7 791 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 FAM228AQ86W67 206 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 TMEM173Q86WV6 379 aaPredicted RBP10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 ECHDC2Q86YB7 292 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 HELQQ8TDG4 1101 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 IGSF21Q96ID5 467 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 CDHR1Q96JP9 859 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 PPP1R16BQ96T49 567 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 NELL2Q99435 816 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 OSMRQ99650 979 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 ZKSCAN3Q9BRR0 538 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 PLA2G2EQ9NZK7 142 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 STK39Q9UEW8 545 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 ADGRG1Q9Y653 693 aa10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 CNOT1A5YKK6 2376 aaKnown RBP10.99□□□□□ -0.65
SMARCAL1-213ENST00000496037 SMARCA5O60264 1052 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 PPP1R11O60927 126 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 KCNK5O95279 499 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms