RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	MAEA	Q7L5Y9	396 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	DEFB128	Q7Z7B8	93 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	FAM178B	Q8IXR5	827 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	RPUSD2	Q8IZ73	545 aa	Known RBP	13.2	□□□□□ -0.3
APTX-233	ENST00000496030	PDILT	Q8N807	584 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	MCPH1	Q8NEM0	835 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	TCP11	Q8WWU5	503 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	BSND	Q8WZ55	320 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	MAP7D2	Q96T17	732 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	PPP1R16B	Q96T49	567 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	IFT122	Q9HBG6	1241 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	STK17A	Q9UEE5	414 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	CCDC39	Q9UFE4	941 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	AKT3	Q9Y243	479 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	COL4A3BP	Q9Y5P4	624 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030	SQOR	Q9Y6N5	450 aa		13.2	□□□□□ -0.3
APTX-233	ENST00000496030		A0A087WZ62	844 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030		A0A1B0GVL5	298 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	GHR	P10912	638 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	CCDC73	Q6ZRK6	1079 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	RHPN2	Q8IUC4	686 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	GJD3	Q8N144	294 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	ZNF710	Q8N1W2	664 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	DBF4B	Q8NFT6	615 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	PSPC1	Q8WXF1	523 aa	Known RBP	13.19	□□□□□ -0.3
APTX-233	ENST00000496030	LARP4B	Q92615	738 aa	Known RBP	13.19	□□□□□ -0.3
APTX-233	ENST00000496030	CCDC43	Q96MW1	224 aa	Known RBP	13.19	□□□□□ -0.3
APTX-233	ENST00000496030	PHOX2B	Q99453	314 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	OSMR	Q99650	979 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.19	□□□□□ -0.3
APTX-233	ENST00000496030	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.19	□□□□□ -0.3
APTX-233	ENST00000496030	GOLPH3L	Q9H4A5	285 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	KCNH3	Q9ULD8	1083 aa		13.19	□□□□□ -0.3
APTX-233	ENST00000496030	NOC2L	Q9Y3T9	749 aa	Known RBP	13.19	□□□□□ -0.3
APTX-233	ENST00000496030	ASAP2	O43150	1006 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	CSDE1	O75534	798 aa	Known RBP	13.18	□□□□□ -0.3
APTX-233	ENST00000496030	SSB	P05455	408 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
APTX-233	ENST00000496030	SRGAP2C	P0DJJ0	459 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	DARS	P14868	501 aa	Known RBP	13.18	□□□□□ -0.3
APTX-233	ENST00000496030	PFKFB1	P16118	471 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	EIF4B	P23588	611 aa	Known RBP	13.18	□□□□□ -0.3
APTX-233	ENST00000496030	TXLNA	P40222	546 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	CDC42EP1	Q00587	391 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	POU5F1B	Q06416	359 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	CAPS	Q13938	189 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	DHX8	Q14562	1220 aa	Known RBP	13.18	□□□□□ -0.3
APTX-233	ENST00000496030	MXD4	Q14582	209 aa	Predicted RBP	13.18	□□□□□ -0.3
APTX-233	ENST00000496030	FAM102B	Q5T8I3	360 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	ZNF410	Q86VK4	478 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	GPBP1	Q86WP2	473 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.18	□□□□□ -0.3
APTX-233	ENST00000496030	TMEM87A	Q8NBN3	555 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	RASSF8	Q8NHQ8	419 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	GDPD5	Q8WTR4	605 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	TMX1	Q9H3N1	280 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	MINDY3	Q9H8M7	445 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	ERVK-5	Q9HDB9	667 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	KCND2	Q9NZV8	630 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	PADI3	Q9ULW8	664 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	GINS2	Q9Y248	185 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	C5orf42	Q9H799	3197 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	CACNA1A	O00555	2505 aa		13.18	□□□□□ -0.3
APTX-233	ENST00000496030	LCHN	A4D1U4	455 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	MYMK	A6NI61	221 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	SFI1	A8K8P3	1242 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030		M0QZ92	97 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	POLR2D	O15514	142 aa	Known RBP	13.17	□□□□□ -0.3
APTX-233	ENST00000496030	HIP1R	O75146	1068 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	GADD45B	O75293	160 aa	Predicted RBP	13.17	□□□□□ -0.3
APTX-233	ENST00000496030	PFKM	P08237	780 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	IL9	P15248	144 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	CD52	P31358	61 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	STAT6	P42226	847 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	NDUFA8	P51970	172 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	PTEN	P60484	403 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	RAD51AP2	Q09MP3	1159 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	GIT2	Q14161	759 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	TSHZ1	Q6ZSZ6	1077 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.17	□□□□□ -0.3
APTX-233	ENST00000496030	FAM228A	Q86W67	206 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	HERC6	Q8IVU3	1022 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	IQUB	Q8NA54	791 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.17	□□□□□ -0.3
APTX-233	ENST00000496030	KIFAP3	Q92845	792 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	DHX58	Q96C10	678 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	DNAJC19	Q96DA6	116 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	REEP2	Q9BRK0	252 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	UBE2Z	Q9H832	354 aa	Predicted RBP	13.17	□□□□□ -0.3
APTX-233	ENST00000496030	KBTBD4	Q9NVX7	518 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	FAM13B	Q9NYF5	915 aa		13.17	□□□□□ -0.3
APTX-233	ENST00000496030	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.16	□□□□□ -0.3
APTX-233	ENST00000496030	ACTN4	O43707	911 aa	Known RBP	13.16	□□□□□ -0.3
APTX-233	ENST00000496030	FGFR4	P22455	802 aa		13.16	□□□□□ -0.3
APTX-233	ENST00000496030	SSTR3	P32745	418 aa	Predicted RBP	13.16	□□□□□ -0.3
APTX-233	ENST00000496030	ZNF131	P52739	623 aa		13.16	□□□□□ -0.3
APTX-233	ENST00000496030	CACNB1	Q02641	598 aa	Predicted RBP	13.16	□□□□□ -0.3
APTX-233	ENST00000496030	CSPP1	Q1MSJ5	1256 aa		13.16	□□□□□ -0.3
APTX-233	ENST00000496030	LONRF3	Q496Y0	759 aa		13.16	□□□□□ -0.3
APTX-233	ENST00000496030	CNKSR3	Q6P9H4	555 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms