RNA–Protein interactions for RNA: ENST00000495973.5

TBRG4-217, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best)

Gene TBRG4, Length 3,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-217ENST00000495973 RPS6KA1Q15418 735 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 EPC2Q52LR7 807 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 CCDC60Q8IWA6 550 aaPredicted RBP12.11□□□□□ -0.47
TBRG4-217ENST00000495973 ZC3H3Q8IXZ2 948 aaKnown RBP12.11□□□□□ -0.47
TBRG4-217ENST00000495973 R3HDMLQ9H3Y0 253 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 ELP3Q9H9T3 547 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 L1RE1Q9UN81 338 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 PCDHA10Q9Y5I2 948 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 ADRB2P07550 413 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 SOX5P35711 763 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 NPTX2P47972 431 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 GALCP54803 685 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 TRADDQ15628 312 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 DNAJC21Q5F1R6 531 aaKnown RBP12.11□□□□□ -0.47
TBRG4-217ENST00000495973 B3GNT9Q6UX72 402 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 PEX26Q7Z412 305 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 XXYLT1Q8NBI6 393 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 LNX1Q8TBB1 728 aaPredicted RBP12.11□□□□□ -0.47
TBRG4-217ENST00000495973 PLEKHO2Q8TD55 490 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 NSUN6Q8TEA1 469 aaKnown RBP12.11□□□□□ -0.47
TBRG4-217ENST00000495973 ZNF526Q8TF50 670 aaPredicted RBP12.11□□□□□ -0.47
TBRG4-217ENST00000495973 VPS33BQ9H267 617 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 PLCB1Q9NQ66 1216 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 RAB21Q9UL25 225 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 CENPFP49454 3210 aa12.11□□□□□ -0.47
TBRG4-217ENST00000495973 FZD9O00144 591 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 DSG3P32926 999 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 SMTNP53814 917 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 GUCY2DQ02846 1103 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 CFAP221Q4G0U5 840 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 TXLNBQ8N3L3 684 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 BORCS6Q96GS4 357 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 MOV10L1Q9BXT6 1211 aaKnown RBP12.1□□□□□ -0.47
TBRG4-217ENST00000495973 JPH1Q9HDC5 661 aaPredicted RBP12.1□□□□□ -0.47
TBRG4-217ENST00000495973 ZNF214Q9UL59 606 aaPredicted RBP12.1□□□□□ -0.47
TBRG4-217ENST00000495973 RGS20O76081 388 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 COPB2P35606 906 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 PRKCEQ02156 737 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 MKRN3Q13064 507 aaKnown RBP12.1□□□□□ -0.47
TBRG4-217ENST00000495973 GPS2Q13227 327 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 DPY19L2P1Q6NXN4 242 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.1□□□□□ -0.47
TBRG4-217ENST00000495973 VSIG10LQ86VR7 867 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 SYN2Q92777 582 aaPredicted RBP12.1□□□□□ -0.47
TBRG4-217ENST00000495973 FAM213AQ9BRX8 229 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 TEX13BQ9BXU2 312 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 RABEP2Q9H5N1 569 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 GPRC5DQ9NZD1 345 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 ANKFY1Q9P2R3 1169 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 APEX2Q9UBZ4 518 aa12.1□□□□□ -0.47
TBRG4-217ENST00000495973 LRRIQ4A6NIV6 560 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 PJA2O43164 708 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 BCRP11274 1271 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 MXI1P50539 228 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 KRT76Q01546 638 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 ZNF211Q13398 564 aaPredicted RBP12.09□□□□□ -0.47
TBRG4-217ENST00000495973 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
TBRG4-217ENST00000495973 VGLL4Q14135 290 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 DHX38Q92620 1227 aaKnown RBP12.09□□□□□ -0.47
TBRG4-217ENST00000495973 KLRG1Q96E93 195 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 SELENOOQ9BVL4 669 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 TRIM31Q9BZY9 425 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 ACAD9Q9H845 621 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 IGSF9BQ9UPX0 1349 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 EIF3JO75822 258 aaKnown RBP12.09□□□□□ -0.47
TBRG4-217ENST00000495973 PGK2P07205 417 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 FERP16591 822 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 ACTR2P61160 394 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 IRX3P78415 501 aaPredicted RBP12.09□□□□□ -0.47
TBRG4-217ENST00000495973 SP2Q02086 613 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 C2CD6Q53TS8 623 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 FAM212AQ96EL1 285 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 CLMNQ96JQ2 1002 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 EPB41L5Q9HCM4 733 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 SLC9A2Q9UBY0 812 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 SPDYE16A6NNV3 312 aaPredicted RBP12.09□□□□□ -0.47
TBRG4-217ENST00000495973 KRT5P13647 590 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 CNGA1P29973 690 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 JAK3P52333 1124 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 CETN1Q12798 172 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 HLTFQ14527 1009 aaKnown RBP eCLIP12.09□□□□□ -0.47
TBRG4-217ENST00000495973 SNRNP35Q16560 246 aaKnown RBP12.09□□□□□ -0.47
TBRG4-217ENST00000495973 ZNF662Q6ZS27 426 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 APOBEC3FQ8IUX4 373 aaKnown RBP12.09□□□□□ -0.47
TBRG4-217ENST00000495973 NEK9Q8TD19 979 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 ARHGEF26Q96DR7 871 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 THAP2Q9H0W7 228 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 TMEM206Q9H813 350 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 ZNF408Q9H9D4 720 aa12.09□□□□□ -0.47
TBRG4-217ENST00000495973 CYP26A1O43174 497 aa12.08□□□□□ -0.48
TBRG4-217ENST00000495973 HEXIM1O94992 359 aaKnown RBP12.08□□□□□ -0.48
TBRG4-217ENST00000495973 HOXA7P31268 230 aaPredicted RBP12.08□□□□□ -0.48
TBRG4-217ENST00000495973 ACOT2P49753 483 aa12.08□□□□□ -0.48
TBRG4-217ENST00000495973 POLGP54098 1239 aaPredicted RBP12.08□□□□□ -0.48
TBRG4-217ENST00000495973 FOXR2Q6PJQ5 311 aa12.08□□□□□ -0.48
TBRG4-217ENST00000495973 CTNNBL1Q8WYA6 563 aaPredicted RBP12.08□□□□□ -0.48
TBRG4-217ENST00000495973 PPP1R16BQ96T49 567 aa12.08□□□□□ -0.48
TBRG4-217ENST00000495973 POLR3FQ9H1D9 316 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms