RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CXCL12P48061 93 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 SRSF1Q07955 248 aaKnown RBP eCLIP10.28□□□□□ -0.76
GARNL3-219ENST00000495172 KIZQ2M2Z5 673 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 ZNF852Q6ZMS4 543 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 Q6ZS52 159 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 STOX1Q6ZVD7 989 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 GRASPQ7Z6J2 395 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-219ENST00000495172 PALB2Q86YC2 1186 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 MCF2L2Q86YR7 1114 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 ITFG1Q8TB96 612 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 FRAT1Q92837 279 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-219ENST00000495172 LPPQ93052 612 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 PCYT2Q99447 389 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.28□□□□□ -0.76
GARNL3-219ENST00000495172 ABCA12Q86UK0 2595 aa10.27□□□□□ -0.76
GARNL3-219ENST00000495172 UBR5O95071 2799 aaPredicted RBP10.27□□□□□ -0.76
GARNL3-219ENST00000495172 PCNX2A6NKB5 2137 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 MEIS3P2A8K0S8 358 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 PATL2C9JE40 543 aaKnown RBP10.27□□□□□ -0.77
GARNL3-219ENST00000495172 NCAM2O15394 837 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 FOXP2O15409 715 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 TEX28O15482 410 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 SNHG28P0DPA3 235 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 ATP5JP18859 108 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 FGFR4P22455 802 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 FSHRP23945 695 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 SLC11A1P49279 550 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 CCR3P51677 355 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 POLGP54098 1239 aaPredicted RBP10.27□□□□□ -0.77
GARNL3-219ENST00000495172 AK2P54819 239 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 FGD1P98174 961 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 NEDD9Q14511 834 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 BMS1Q14692 1282 aaKnown RBP10.27□□□□□ -0.77
GARNL3-219ENST00000495172 UAP1L1Q3KQV9 507 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 WDR44Q5JSH3 913 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 LONP2Q86WA8 852 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 ZNF843Q8N446 348 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 ZNF579Q8NAF0 562 aaKnown RBP10.27□□□□□ -0.77
GARNL3-219ENST00000495172 ING5Q8WYH8 240 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 PHKBQ93100 1093 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 FAM212AQ96EL1 285 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 EMILIN2Q9BXX0 1053 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 NT5C3AQ9H0P0 336 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 ELAC1Q9H777 363 aaKnown RBP10.27□□□□□ -0.77
GARNL3-219ENST00000495172 NRDE2Q9H7Z3 1164 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 TOMM22Q9NS69 142 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 MRPL11Q9Y3B7 192 aaKnown RBP10.27□□□□□ -0.77
GARNL3-219ENST00000495172 PCDHA2Q9Y5H9 948 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 MGAQ8IWI9 3026 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 KDM3AQ9Y4C1 1321 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 SPTAN1Q13813 2472 aaKnown RBP10.27□□□□□ -0.77
GARNL3-219ENST00000495172 PLXNB3Q9ULL4 1909 aa10.27□□□□□ -0.77
GARNL3-219ENST00000495172 MTCL1Q9Y4B5 1905 aaKnown RBP10.27□□□□□ -0.77
GARNL3-219ENST00000495172 DOPEY1Q5JWR5 2465 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
GARNL3-219ENST00000495172 LNP1A1A4G5 178 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 J3QKU1 62 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 GALTP07902 379 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 CEACAM1P13688 526 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 RAP1GAPP47736 663 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 MTHFD1LQ6UB35 978 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 RSPO2Q6UXX9 243 aaPredicted RBP10.26□□□□□ -0.77
GARNL3-219ENST00000495172 FGF13Q92913 245 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 B3GALT6Q96L58 329 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 PHF20Q9BVI0 1012 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 NAPBQ9H115 298 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 ADAMTS10Q9H324 1103 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 ERAP1Q9NZ08 941 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 PNMA2Q9UL42 364 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 CDH7Q9ULB5 785 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 INPP5FQ9Y2H2 1132 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 COL4A2P08572 1712 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 NBPF19A0A087WUL8 3843 aa10.26□□□□□ -0.77
GARNL3-219ENST00000495172 B4E1Z4 1266 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 F8W810 466 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 DHX16O60231 1041 aaKnown RBP10.25□□□□□ -0.77
GARNL3-219ENST00000495172 VTNP04004 478 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 FAM193AP78312 1265 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 GIT2Q14161 759 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 GRM2Q14416 872 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 TSHZ3Q63HK5 1081 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 CEP85Q6P2H3 762 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 ZNF280BQ86YH2 543 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 KIAA0319LQ8IZA0 1049 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 CLASRPQ8N2M8 674 aaKnown RBP10.25□□□□□ -0.77
GARNL3-219ENST00000495172 APPBP2Q92624 585 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 INPP4AQ96PE3 977 aaPredicted RBP10.25□□□□□ -0.77
GARNL3-219ENST00000495172 NELL2Q99435 816 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 ZKSCAN3Q9BRR0 538 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 JMJD4Q9H9V9 463 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 JADE2Q9NQC1 790 aa10.25□□□□□ -0.77
GARNL3-219ENST00000495172 POLR3BQ9NW08 1133 aaPredicted RBP10.25□□□□□ -0.77
GARNL3-219ENST00000495172 SMIM35A0A1B0GVV1 85 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 PATE3B3GLJ2 98 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 CDX4O14627 284 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-219ENST00000495172 GPR182O15218 404 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 GLUD1P00367 558 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 SLC3A2P08195 630 aaKnown RBP10.24□□□□□ -0.77
GARNL3-219ENST00000495172 CHRNB1P11230 501 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 AFF1P51825 1210 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms