RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 IFT122Q9HBG6 1241 aa26.02■■□□□ 1.76
COL27A1-208ENST00000494780 COL4A3BPQ9Y5P4 624 aa26.02■■□□□ 1.76
COL27A1-208ENST00000494780 HCFC2Q9Y5Z7 792 aa26.02■■□□□ 1.76
COL27A1-208ENST00000494780 CCNT1O60563 726 aaKnown RBP26.01■■□□□ 1.75
COL27A1-208ENST00000494780 PFKFB2O60825 505 aa26.01■■□□□ 1.75
COL27A1-208ENST00000494780 CLASP2O75122 1294 aaKnown RBP26.01■■□□□ 1.75
COL27A1-208ENST00000494780 ZC3H11AO75152 810 aaKnown RBP eCLIP26.01■■□□□ 1.754e-7■■□□□ 11.7
COL27A1-208ENST00000494780 NPEPPSP55786 919 aa26.01■■□□□ 1.75
COL27A1-208ENST00000494780 NOMO2Q5JPE7 1267 aa26.01■■□□□ 1.75
COL27A1-208ENST00000494780 ALYREFQ86V81 257 aaKnown RBP26.01■■□□□ 1.75
COL27A1-208ENST00000494780 CEP170P1Q96L14 293 aa26.01■■□□□ 1.75
COL27A1-208ENST00000494780 TBC1D13Q9NVG8 400 aa26.01■■□□□ 1.75
COL27A1-208ENST00000494780 CXCL14O95715 111 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 RFC5P40937 340 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 POLGP54098 1239 aaPredicted RBP26■■□□□ 1.75
COL27A1-208ENST00000494780 ITIH3Q06033 890 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 SIGLEC14Q08ET2 396 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 EPHA7Q15375 998 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 LONRF3Q496Y0 759 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 PIK3AP1Q6ZUJ8 805 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 C4orf19Q8IY42 314 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 VPS52Q8N1B4 723 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 HAS1Q92839 578 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 PGBD4Q96DM1 585 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 ZBP1Q9H171 429 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 ADAM7Q9H2U9 754 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 DHX33Q9H6R0 707 aaKnown RBP26■■□□□ 1.75
COL27A1-208ENST00000494780 NRDE2Q9H7Z3 1164 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 AGPAT5Q9NUQ2 364 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 WRAP73Q9P2S5 460 aaPredicted RBP26■■□□□ 1.75
COL27A1-208ENST00000494780 TPCN1Q9ULQ1 816 aa26■■□□□ 1.75
COL27A1-208ENST00000494780 MARCH6O60337 910 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 OFD1O75665 1012 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 CA8P35219 290 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 GIT2Q14161 759 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 PTPN21Q16825 1174 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 CES5AQ6NT32 575 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 SRGAP1Q7Z6B7 1085 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 DDX53Q86TM3 631 aaKnown RBP25.99■■□□□ 1.75
COL27A1-208ENST00000494780 TMEM173Q86WV6 379 aaPredicted RBP25.99■■□□□ 1.75
COL27A1-208ENST00000494780 ZNF579Q8NAF0 562 aaKnown RBP25.99■■□□□ 1.75
COL27A1-208ENST00000494780 OXER1Q8TDS5 423 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 PRPF31Q8WWY3 499 aaKnown RBP25.99■■□□□ 1.75
COL27A1-208ENST00000494780 PSPC1Q8WXF1 523 aaKnown RBP25.99■■□□□ 1.75
COL27A1-208ENST00000494780 IGSF21Q96ID5 467 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 NECTIN4Q96NY8 510 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 INPP5FQ9Y2H2 1132 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 NR2E1Q9Y466 385 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 IRAK3Q9Y616 596 aa25.99■■□□□ 1.75
COL27A1-208ENST00000494780 MEIS3P2A8K0S8 358 aa25.98■■□□□ 1.75
COL27A1-208ENST00000494780 GAS2O43903 313 aaKnown RBP25.98■■□□□ 1.75
COL27A1-208ENST00000494780 GALTP07902 379 aa25.98■■□□□ 1.75
COL27A1-208ENST00000494780 RNASELQ05823 741 aaKnown RBP25.98■■□□□ 1.75
COL27A1-208ENST00000494780 OTUD6AQ7L8S5 288 aa25.98■■□□□ 1.75
COL27A1-208ENST00000494780 WASF1Q92558 559 aa25.98■■□□□ 1.75
COL27A1-208ENST00000494780 LXNQ9BS40 222 aa25.98■■□□□ 1.75
COL27A1-208ENST00000494780 GJB4Q9NTQ9 266 aa25.98■■□□□ 1.75
COL27A1-208ENST00000494780 PCDHB2Q9Y5E7 798 aa25.98■■□□□ 1.75
COL27A1-208ENST00000494780 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.97■■□□□ 1.75
COL27A1-208ENST00000494780 CTSAP10619 480 aa25.97■■□□□ 1.75
COL27A1-208ENST00000494780 YWHABP31946 246 aaKnown RBP25.97■■□□□ 1.75
COL27A1-208ENST00000494780 MRPL10Q7Z7H8 261 aaKnown RBP25.97■■□□□ 1.75
COL27A1-208ENST00000494780 SUGP1Q8IWZ8 645 aaKnown RBP25.97■■□□□ 1.75
COL27A1-208ENST00000494780 SLFN12Q8IYM2 578 aa25.97■■□□□ 1.75
COL27A1-208ENST00000494780 TMEM87AQ8NBN3 555 aa25.97■■□□□ 1.75
COL27A1-208ENST00000494780 TCP11Q8WWU5 503 aa25.97■■□□□ 1.75
COL27A1-208ENST00000494780 TMEM143Q96AN5 459 aa25.97■■□□□ 1.75
COL27A1-208ENST00000494780 DZANK1Q9NVP4 752 aa25.97■■□□□ 1.75
COL27A1-208ENST00000494780 ASAP2O43150 1006 aa25.96■■□□□ 1.75
COL27A1-208ENST00000494780 BAG4O95429 457 aaKnown RBP25.96■■□□□ 1.75
COL27A1-208ENST00000494780 CTDNEP1O95476 244 aa25.96■■□□□ 1.75
COL27A1-208ENST00000494780 SRGAP2CP0DJJ0 459 aa25.96■■□□□ 1.75
COL27A1-208ENST00000494780 LAMTOR4Q0VGL1 99 aa25.96■■□□□ 1.75
COL27A1-208ENST00000494780 ANKRD1Q15327 319 aa25.96■■□□□ 1.75
COL27A1-208ENST00000494780 POTEDQ86YR6 584 aa25.96■■□□□ 1.75
COL27A1-208ENST00000494780 FBXL6Q8N531 539 aa25.96■■□□□ 1.75
COL27A1-208ENST00000494780 URGCPQ8TCY9 931 aa25.96■■□□□ 1.75
COL27A1-208ENST00000494780 ZSWIM4Q9H7M6 989 aa25.96■■□□□ 1.75
COL27A1-208ENST00000494780 RGL1Q9NZL6 768 aa25.96■■□□□ 1.75
COL27A1-208ENST00000494780 ORC3Q9UBD5 711 aaPredicted RBP25.96■■□□□ 1.75
COL27A1-208ENST00000494780 STK39Q9UEW8 545 aa25.96■■□□□ 1.75
COL27A1-208ENST00000494780 SLC11A1P49279 550 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 ANAPC15P60006 121 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 SPIRE1Q08AE8 756 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 EARS2Q5JPH6 523 aaKnown RBP25.95■■□□□ 1.74
COL27A1-208ENST00000494780 NCAPH2Q6IBW4 605 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 AGMOQ6ZNB7 445 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 BCL7CQ8WUZ0 217 aaPredicted RBP25.95■■□□□ 1.74
COL27A1-208ENST00000494780 AUTS2Q8WXX7 1259 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 ASIC4Q96FT7 647 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 DYDC2Q96IM9 177 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 RIPOR3Q96MK2 946 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 PRRX2Q99811 253 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 POMKQ9H5K3 350 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 MINDY3Q9H8M7 445 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 DNAJB4Q9UDY4 337 aa25.95■■□□□ 1.74
COL27A1-208ENST00000494780 TRIOO75962 3097 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 CNTNAP2Q9UHC6 1331 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 HOXA11P31270 313 aaPredicted RBP25.94■■□□□ 1.74
COL27A1-208ENST00000494780 MTHFRP42898 656 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms