RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 PFASO15067 1338 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 USP17L15C9J2P7 530 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 USP17L10C9JJH3 530 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 USP17L13C9JLJ4 530 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 USP17L11C9JVI0 530 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 USP17L18D6R9N7 530 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 USP17L22D6RA61 530 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 USP17L17D6RBQ6 530 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 USP17L19D6RCP7 530 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 USP17L20D6RJB6 530 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 KRT18P05783 430 aaKnown RBP16.58■□□□□ 0.24
SDF4-207ENST00000494748 PEX5P50542 639 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 EIF6P56537 245 aaKnown RBP16.58■□□□□ 0.24
SDF4-207ENST00000494748 USP17L24Q0WX57 530 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 PPP2R5AQ15172 486 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 USP17L6PQ6QN14 398 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 CNKSR1Q969H4 720 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 LENG9Q96B70 501 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 SLC24A3Q9HC58 644 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 FGFR1OP2Q9NVK5 253 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 MYH11P35749 1972 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 GOLGA6L10A0A0M3HER8 536 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 PPP1R12AO14974 1030 aaPredicted RBP16.57■□□□□ 0.24
SDF4-207ENST00000494748 RARGP13631 454 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 CHRNA3P32297 505 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 SATB1Q01826 763 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 MGAT5Q09328 741 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 CYP1B1Q16678 543 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 CBWD6Q4V339 395 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 CBWD3Q5JTY5 395 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 CBWD5Q5RIA9 395 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 RUSC1Q9BVN2 902 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 PSTPIP2Q9H939 334 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 BATF3Q9NR55 127 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 DNAJC12Q9UKB3 198 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 ALG6Q9Y672 507 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 LDHCP07864 332 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 PLCG2P16885 1265 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 SLC16A2P36021 539 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 PDE6CP51160 858 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 ZNF131P52739 623 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 TCEAL1Q15170 157 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 ERICH1Q86X53 443 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 FMNL3Q8IVF7 1028 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 CTNNBL1Q8WYA6 563 aaPredicted RBP16.57■□□□□ 0.24
SDF4-207ENST00000494748 SMNDC1O75940 238 aaKnown RBP eCLIP16.57■□□□□ 0.242e-6■■■□□ 17.5
SDF4-207ENST00000494748 COPS2P61201 443 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 MPP2Q14168 576 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 NFIXQ14938 502 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 LRRC14Q15048 493 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 FITM2Q8N6M3 262 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 ZNF622Q969S3 477 aaKnown RBP eCLIP16.57■□□□□ 0.24
SDF4-207ENST00000494748 TRIM33Q9UPN9 1127 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 ADAMTSL1Q8N6G6 1762 aa16.57■□□□□ 0.24
SDF4-207ENST00000494748 RASGRF2O14827 1237 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 CDC25CP30307 473 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 CCNG1P51959 295 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 CTTNQ14247 550 aaKnown RBP16.56■□□□□ 0.24
SDF4-207ENST00000494748 C11orf63Q6NUN7 778 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 KIF2BQ8N4N8 673 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 CD101Q93033 1021 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 NOP53Q9NZM5 478 aaKnown RBP16.56■□□□□ 0.24
SDF4-207ENST00000494748 PCDHB13Q9Y5F0 798 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 SYNGAP1Q96PV0 1343 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 ANKRD62A6NC57 917 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 FOXO6A8MYZ6 492 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 TCP11X1B4DZS4 312 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 ZBTB5O15062 677 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 RPA1P27694 616 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 FMO5P49326 533 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 KIF22Q14807 665 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 NAIF1Q69YI7 327 aaPredicted RBP16.56■□□□□ 0.24
SDF4-207ENST00000494748 DDX23Q9BUQ8 820 aaKnown RBP16.56■□□□□ 0.24
SDF4-207ENST00000494748 USP40Q9NVE5 1235 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 ADAM22Q9P0K1 906 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 GAKO14976 1311 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 RGL2O15211 777 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 MARCH6O60337 910 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 DIAPH2O60879 1101 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 KRT13P13646 458 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 KCNQ4P56696 695 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 C11orf91Q3C1V1 193 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 RMDN2Q96LZ7 410 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 ZSWIM1Q9BR11 485 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 NSRP1Q9H0G5 558 aaKnown RBP16.56■□□□□ 0.24
SDF4-207ENST00000494748 RASAL2Q9UJF2 1139 aa16.56■□□□□ 0.24
SDF4-207ENST00000494748 SIPA1L1O43166 1804 aa16.55■□□□□ 0.24
SDF4-207ENST00000494748 CCND1P24385 295 aa16.55■□□□□ 0.24
SDF4-207ENST00000494748 NFIL3Q16649 462 aa16.55■□□□□ 0.24
SDF4-207ENST00000494748 CPNE8Q86YQ8 564 aa16.55■□□□□ 0.24
SDF4-207ENST00000494748 SRP68Q9UHB9 627 aaKnown RBP16.55■□□□□ 0.24
SDF4-207ENST00000494748 KCNQ2O43526 872 aa16.55■□□□□ 0.24
SDF4-207ENST00000494748 ABL2P42684 1182 aa16.55■□□□□ 0.24
SDF4-207ENST00000494748 COG2Q14746 738 aa16.55■□□□□ 0.24
SDF4-207ENST00000494748 CCDC137Q6PK04 289 aaKnown RBP16.55■□□□□ 0.24
SDF4-207ENST00000494748 LMO3Q8TAP4 145 aa16.55■□□□□ 0.24
SDF4-207ENST00000494748 UTP4Q969X6 686 aaKnown RBP16.55■□□□□ 0.24
SDF4-207ENST00000494748 DNAJC5Q9H3Z4 198 aa16.55■□□□□ 0.24
SDF4-207ENST00000494748 PODXLO00592 558 aa16.54■□□□□ 0.24
SDF4-207ENST00000494748 CCNB1P14635 433 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms