RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 MIA3Q5JRA6 1907 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 KLF18A0A0U1RQI7 1052 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 SMIM31A0A1B0GVY4 71 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TTC26A0AVF1 554 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 MACROD2A1Z1Q3 448 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 GOLGA8AA7E2F4 631 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 SFI1A8K8P3 1242 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TMEM110-MUSTN1A8MSY1 372 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 PHF20L1A8MW92 1017 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 E7EWF7 191 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 CETN3O15182 167 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 HNRNPRO43390 633 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 RAD51CO43502 376 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 STRNO43815 780 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 GFPT2O94808 682 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 UNC5CO95185 931 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 EYA4O95677 639 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 GNA14O95837 355 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 AGTP01019 485 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 POLR3DP05423 398 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 GLI1P08151 1106 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 PABPC4LP0CB38 370 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 SRGNP10124 158 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 MYBL1P10243 752 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 PORP16435 677 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 EIF2S2P20042 333 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 MARCKSP29966 332 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 CDC25AP30304 524 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 HNRNPH3P31942 346 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 CCT6AP40227 531 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 RGS2P41220 211 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 IARSP41252 1262 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 PHKA2P46019 1235 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 BAG6P46379 1132 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 DNM2P50570 870 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 CLCN2P51788 898 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 KIF11P52732 1056 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 CACNA2D1P54289 1103 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 HDAC4P56524 1084 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 C1QTNF8P60827 252 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 MAGOHP61326 146 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 PDE1BQ01064 536 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 SLC7A5Q01650 507 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 PLOD1Q02809 727 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 GUCY2DQ02846 1103 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 MCL1Q07820 350 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 POU4F2Q12837 409 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 DPYDQ12882 1025 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 ITGA9Q13797 1035 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 INF2Q27J81 1249 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 MCMDC2Q4G0Z9 681 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 LIN52Q52LA3 116 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 FAM133BQ5BKY9 247 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 TNFAIP8L3Q5GJ75 292 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TCP11X2Q5H9J9 407 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 SH3PXD2AQ5TCZ1 1133 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 KRT40Q6A162 431 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TMEM132EQ6IEE7 984 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TMEM53Q6P2H8 277 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 PI16Q6UXB8 463 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 BTNL9Q6UXG8 535 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 LRRC74BQ6ZQY2 392 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 SEPT14Q6ZU15 432 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 C3orf62Q6ZUJ4 267 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 ARHGAP27Q6ZUM4 889 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 INTS8Q75QN2 995 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 MCM10Q7L590 875 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TAOK1Q7L7X3 1001 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 KRT27Q7Z3Y8 459 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TMEM110Q86TL2 294 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 SPATA24Q86W54 205 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 COL23A1Q86Y22 540 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 PASD1Q8IV76 773 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 FOXP4Q8IVH2 680 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 NELFCDQ8IXH7 590 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 IQCF2Q8IXL9 164 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 MB21D2Q8IYB1 491 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 LRRC34Q8IZ02 419 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 ST13P4Q8IZP2 240 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 STK11IPQ8N1F8 1099 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 CCDC82Q8N4S0 544 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 RNF10Q8N5U6 811 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 MB21D1Q8N884 522 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 USP38Q8NB14 1042 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 TBC1D16Q8TBP0 767 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 ZNF507Q8TCN5 953 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 PIGOQ8TEQ8 1089 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 NAT14Q8WUY8 206 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 CPLX3Q8WVH0 158 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 UBLCP1Q8WVY7 318 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 SEC14L1Q92503 715 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 GATA6Q92908 595 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 BHMTQ93088 406 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 MAGOHBQ96A72 148 aaKnown RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 GRAMD1AQ96CP6 724 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 PGM2Q96G03 612 aa2.94□□□□□ -1.94
MDC1-208ENST00000494654 DHTKD1Q96HY7 919 aaPredicted RBP2.94□□□□□ -1.94
MDC1-208ENST00000494654 COG3Q96JB2 828 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms