RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 FOSP01100 380 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 SRGAP2BP0DMP2 458 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 HOXB8P17481 243 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 SYT1P21579 422 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 GPC3P51654 580 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 SAFBQ15424 915 aaKnown RBP eCLIP13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 PRR16Q569H4 304 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 CWF19L1Q69YN2 538 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 CES5AQ6NT32 575 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 PPP1R18Q6NYC8 613 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 TEX2Q8IWB9 1127 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 VPS52Q8N1B4 723 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 FLCNQ8NFG4 579 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 PHKBQ93100 1093 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 SH3GLB2Q9NR46 395 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 NR2E1Q9Y466 385 aa13.19□□□□□ -0.3
CSNK1E-212ENST00000494610 C2orf16Q68DN1 1984 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 PROB1E7EW31 1015 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 CHMP2AO43633 222 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 ZC3H11AO75152 810 aaKnown RBP eCLIP13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 ZSCAN20P17040 1043 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 NPR3P17342 541 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 EIF4BP23588 611 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 NBL1P41271 181 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 AFF1P51825 1210 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 PFKFB3Q16875 520 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 TPRNQ4KMQ1 711 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 ASTLQ6HA08 431 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 GALNT17Q6IS24 598 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 NIPA1Q7RTP0 329 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 ST13P5Q8NFI4 369 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 LENG9Q96B70 501 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 ZBP1Q9H171 429 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 GLT8D2Q9H1C3 349 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 ZSCAN16Q9H4T2 348 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 DNAJB4Q9UDY4 337 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 DBR1Q9UK59 544 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 SAMM50Q9Y512 469 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 CACNA1AO00555 2505 aa13.18□□□□□ -0.3
CSNK1E-212ENST00000494610 A0A0U1RQF3 1178 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 NARSO43776 548 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 SSBP05455 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 PSAPP07602 524 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 ZSCAN22P10073 491 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 DARSP14868 501 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 PPM1AP35813 382 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 ITIH3Q06033 890 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 GNL2Q13823 731 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 ODR4Q5SWX8 454 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 KSR1Q8IVT5 923 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 UBALD2Q8IYN6 164 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 TDRD5Q8NAT2 981 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 FBXO18Q8NFZ0 1043 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 SLC22A17Q8WUG5 538 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 NLRP7Q8WX94 980 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 SCLT1Q96NL6 688 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 GBP4Q96PP9 640 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 GBP3Q9H0R5 595 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 MFSD1Q9H3U5 465 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 INPP5FQ9Y2H2 1132 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 PCDHA10Q9Y5I2 948 aa13.17□□□□□ -0.3
CSNK1E-212ENST00000494610 DENND4AQ7Z401 1863 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 FSD2A1L4K1 749 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 HOXA2O43364 376 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 OATP04181 439 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 CYP3A4P08684 503 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 MTHFRP42898 656 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 ALDH7A1P49419 539 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 PRKCEQ02156 737 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 ZNF746Q6NUN9 644 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 BRAPQ7Z569 592 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 ADSSL1Q8N142 457 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 RSAD2Q8WXG1 361 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 MAP7D2Q96T17 732 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 NRDE2Q9H7Z3 1164 aa13.16□□□□□ -0.3
CSNK1E-212ENST00000494610 A0A087WZ62 844 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 MSH4O15457 936 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 MAGEB2O15479 319 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 N4BP1O75113 896 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 EOMESO95936 686 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 F13A1P00488 732 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 GALTP07902 379 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 PHKA2P46019 1235 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 SLC11A1P49279 550 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 MTERF2Q49AM1 385 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 ATAT1Q5SQI0 421 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 ZDHHC14Q8IZN3 488 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 TMEM169Q96HH4 297 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 IGSF21Q96ID5 467 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 NECTIN4Q96NY8 510 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 FDXACB1Q9BRP7 624 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 UNC45AQ9H3U1 944 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 DISC1Q9NRI5 854 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 TBC1D22BQ9NU19 505 aa13.15□□□□□ -0.3
CSNK1E-212ENST00000494610 TBC1D13Q9NVG8 400 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms