RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 RFX1P22670 979 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 KLRC2P26717 231 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 PDIA3P30101 505 aaKnown RBP10.8□□□□□ -0.68
UBR4-216ENST00000494503 HSPA4P34932 840 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 POLGP54098 1239 aaPredicted RBP10.8□□□□□ -0.68
UBR4-216ENST00000494503 CDC42EP1Q00587 391 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 KCNC3Q14003 757 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 LETM2Q2VYF4 491 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 ZNF598Q86UK7 904 aaKnown RBP10.8□□□□□ -0.68
UBR4-216ENST00000494503 BLIDQ8IZY5 108 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 FLCNQ8NFG4 579 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 RDM1Q8NG50 284 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 SLC7A3Q8WY07 619 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 PGBD4Q96DM1 585 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 IRF2BPLQ9H1B7 796 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 SH3GLB2Q9NR46 395 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 TBC1D13Q9NVG8 400 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 DZANK1Q9NVP4 752 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 LIMD1Q9UGP4 676 aa10.8□□□□□ -0.68
UBR4-216ENST00000494503 NID2Q14112 1375 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 CCDC194A0A1B0GVG4 234 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 MEIS3P2A8K0S8 358 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 STK25O00506 426 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 ST18O60284 1047 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 PSMD10O75832 226 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 DEXIO95424 95 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 RAB27AP51159 221 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 PSMC5P62195 406 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 GIT2Q14161 759 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 NONOQ15233 471 aaKnown RBP eCLIP10.79□□□□□ -0.68
UBR4-216ENST00000494503 NTRK3Q16288 839 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 INF2Q27J81 1249 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 Q4G0T1 1027 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 CCDC149Q6ZUS6 474 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 ZNF410Q86VK4 478 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 UBALD2Q8IYN6 164 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 ACSF2Q96CM8 615 aaPredicted RBP10.79□□□□□ -0.68
UBR4-216ENST00000494503 IGSF21Q96ID5 467 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 CEP170P1Q96L14 293 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 CCDC43Q96MW1 224 aaKnown RBP10.79□□□□□ -0.68
UBR4-216ENST00000494503 JPH2Q9BR39 696 aaPredicted RBP10.79□□□□□ -0.68
UBR4-216ENST00000494503 EMILIN2Q9BXX0 1053 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 ZBP1Q9H171 429 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 NRDE2Q9H7Z3 1164 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 DNAJB4Q9UDY4 337 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 FBXL21Q9UKT6 434 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 PCDHB2Q9Y5E7 798 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 COL4A3BPQ9Y5P4 624 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 CYP46A1Q9Y6A2 500 aa10.79□□□□□ -0.68
UBR4-216ENST00000494503 C2orf16Q68DN1 1984 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 CARNS1A5YM72 827 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 ERLIN2O94905 339 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 POMCP01189 267 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 GALTP07902 379 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 CTSAP10619 480 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 SLC11A1P49279 550 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 AK2P54819 239 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 NPEPPSP55786 919 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 TARBP2Q15633 366 aaKnown RBP10.78□□□□□ -0.68
UBR4-216ENST00000494503 NCAPH2Q6IBW4 605 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 KIAA1841Q6NSI8 718 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 RUFY3Q7L099 469 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 KRT25Q7Z3Z0 450 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 DDX53Q86TM3 631 aaKnown RBP10.78□□□□□ -0.68
UBR4-216ENST00000494503 PPFIBP1Q86W92 1011 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 BCL7CQ8WUZ0 217 aaPredicted RBP10.78□□□□□ -0.68
UBR4-216ENST00000494503 PSPC1Q8WXF1 523 aaKnown RBP10.78□□□□□ -0.68
UBR4-216ENST00000494503 TMEM143Q96AN5 459 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 AIFM3Q96NN9 605 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 APOL6Q9BWW8 343 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 NIFKQ9BYG3 293 aaKnown RBP10.78□□□□□ -0.68
UBR4-216ENST00000494503 SFXN1Q9H9B4 322 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 RSAD1Q9HA92 442 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 CYP26B1Q9NR63 512 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 KCNJ14Q9UNX9 436 aa10.78□□□□□ -0.68
UBR4-216ENST00000494503 PRG3Q9Y2Y8 225 aaPredicted RBP10.78□□□□□ -0.68
UBR4-216ENST00000494503 TDRD15B5MCY1 1934 aaKnown RBP10.78□□□□□ -0.68
UBR4-216ENST00000494503 RIF1Q5UIP0 2472 aaKnown RBP10.77□□□□□ -0.69
UBR4-216ENST00000494503 SLC37A4O43826 429 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 CCNT1O60563 726 aaKnown RBP10.77□□□□□ -0.69
UBR4-216ENST00000494503 DKC1O60832 514 aaKnown RBP eCLIP10.77□□□□□ -0.69
UBR4-216ENST00000494503 MAFO75444 373 aaPredicted RBP10.77□□□□□ -0.69
UBR4-216ENST00000494503 OFD1O75665 1012 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 URODP06132 367 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 XBP1P17861 261 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 OR1G1P47890 313 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 QARSP47897 775 aaKnown RBP10.77□□□□□ -0.69
UBR4-216ENST00000494503 PTPN14Q15678 1187 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 ANO5Q75V66 913 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 ZNF280BQ86YH2 543 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 PLCD3Q8N3E9 789 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 ETNPPLQ8TBG4 499 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 TRIM6Q9C030 488 aaPredicted RBP10.77□□□□□ -0.69
UBR4-216ENST00000494503 MRPL17Q9NRX2 175 aaKnown RBP10.77□□□□□ -0.69
UBR4-216ENST00000494503 AGPAT5Q9NUQ2 364 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 FAN1Q9Y2M0 1017 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 USP34Q70CQ2 3546 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 ARID2Q68CP9 1835 aa10.77□□□□□ -0.69
UBR4-216ENST00000494503 EML1O00423 815 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms