RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ALPK3Q96L96 1907 aa9.38□□□□□ -0.91
RIF1-211ENST00000494333 TRIOBPQ9H2D6 2365 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 ABCB11O95342 1321 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 LOC102724159A0A0B4J2E5 919 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 B4DLN1 442 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 ZNF862O60290 1169 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 ZEB2O60315 1214 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 LIG1P18858 919 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 ITGB8P26012 769 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 CDK7P50613 346 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 MRPL12P52815 198 aaKnown RBP9.37□□□□□ -0.91
RIF1-211ENST00000494333 NKX3-2P78367 333 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 WTAPQ15007 396 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 SART3Q15020 963 aaKnown RBP9.37□□□□□ -0.91
RIF1-211ENST00000494333 PWP2Q15269 919 aaKnown RBP9.37□□□□□ -0.91
RIF1-211ENST00000494333 FSCN1Q16658 493 aaKnown RBP9.37□□□□□ -0.91
RIF1-211ENST00000494333 TSNAXIP1Q2TAA8 658 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 DUSP28Q4G0W2 176 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 ANKRD34AQ69YU3 496 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 CXCL17Q6UXB2 119 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 STOX1Q6ZVD7 989 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 ANKRD33Q7Z3H0 272 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 MCF2L2Q86YR7 1114 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 DNERQ8NFT8 737 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 GRIN3AQ8TCU5 1115 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 IGDCC4Q8TDY8 1250 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 WDR89Q96FK6 387 aaPredicted RBP9.37□□□□□ -0.91
RIF1-211ENST00000494333 TOX2Q96NM4 488 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 TAAR1Q96RJ0 339 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 NOC4LQ9BVI4 516 aaKnown RBP9.37□□□□□ -0.91
RIF1-211ENST00000494333 CEP41Q9BYV8 373 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 WDR11Q9BZH6 1224 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 SUGCTQ9HAC7 445 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 CYP4F12Q9HCS2 524 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 MAD2L2Q9UI95 211 aa9.37□□□□□ -0.91
RIF1-211ENST00000494333 MRPL11Q9Y3B7 192 aaKnown RBP9.37□□□□□ -0.91
RIF1-211ENST00000494333 PLXNA1Q9UIW2 1896 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 A0A0U1RQG5 324 aaPredicted RBP9.36□□□□□ -0.91
RIF1-211ENST00000494333 ARVCFO00192 962 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 ZBTB5O15062 677 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 KIAA0355O15063 1070 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 CFBP00751 764 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 VAMP1P23763 118 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 SHHQ15465 462 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 TMEM67Q5HYA8 995 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 FDX2Q6P4F2 183 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 TMEM87AQ8NBN3 555 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 SYTL5Q8TDW5 730 aaPredicted RBP9.36□□□□□ -0.91
RIF1-211ENST00000494333 AMNQ9BXJ7 453 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 MAF1Q9H063 256 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 LSG1Q9H089 658 aaKnown RBP9.36□□□□□ -0.91
RIF1-211ENST00000494333 KRT82Q9NSB4 513 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 COL20A1Q9P218 1284 aa9.36□□□□□ -0.91
RIF1-211ENST00000494333 MROH7Q68CQ1 1323 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 SLC27A2O14975 620 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 CABYRO75952 493 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 TIAF1O95411 115 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 RECKO95980 971 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 IGHA1P01876 353 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 TXNP10599 105 aaKnown RBP9.35□□□□□ -0.91
RIF1-211ENST00000494333 DRD2P14416 443 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 EDNRBP24530 442 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 PREPP48147 710 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 ANTXR2P58335 489 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 TROAPQ12815 778 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 ITGA7Q13683 1181 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 GRM4Q14833 912 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 NECTIN1Q15223 517 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 BMP2KLQ5H9B9 411 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 C9orf50Q5SZB4 431 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 ARHGEF16Q5VV41 709 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 LLGL2Q6P1M3 1020 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 CASC1Q6TDU7 716 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 CATIPQ7Z7H3 387 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 HOMER1Q86YM7 354 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 MB21D2Q8IYB1 491 aaPredicted RBP9.35□□□□□ -0.91
RIF1-211ENST00000494333 C12orf50Q8NA57 414 aaPredicted RBP9.35□□□□□ -0.91
RIF1-211ENST00000494333 NSUN6Q8TEA1 469 aaKnown RBP9.35□□□□□ -0.91
RIF1-211ENST00000494333 SCFD2Q8WU76 684 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 MTMR8Q96EF0 704 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 PIGSQ96S52 555 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 RMDN3Q96TC7 470 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 RIOX1Q9H6W3 641 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 TPSG1Q9NRR2 321 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 RAD18Q9NS91 495 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 CYP8B1Q9UNU6 501 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 PCDHA1Q9Y5I3 950 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 FRMPD3Q5JV73 1810 aa9.35□□□□□ -0.91
RIF1-211ENST00000494333 NKRFO15226 690 aaKnown RBP eCLIP9.34□□□□□ -0.91
RIF1-211ENST00000494333 TLR3O15455 904 aaKnown RBP9.34□□□□□ -0.91
RIF1-211ENST00000494333 PRC1O43663 620 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 CYTH3O43739 400 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 PPP1R11O60927 126 aaPredicted RBP9.34□□□□□ -0.91
RIF1-211ENST00000494333 TIMP1P01033 207 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 MCM5P33992 734 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 LIG3P49916 1009 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 PSMC6P62333 389 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 FPGSQ05932 587 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 DOC2BQ14184 412 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 TTLL4Q14679 1199 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms