RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PEX3P56589 373 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 MAPK7Q13164 816 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
TRA2A-209ENST00000494255 FAM109BQ6ICB4 259 aaPredicted RBP13.78□□□□□ -0.2
TRA2A-209ENST00000494255 HERC6Q8IVU3 1022 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 DAW1Q8N136 415 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 LRRC27Q9C0I9 530 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 MAGEF1Q9HAY2 307 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 CHST12Q9NRB3 414 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 DACT1Q9NYF0 836 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 MSRAQ9UJ68 235 aa13.78□□□□□ -0.2
TRA2A-209ENST00000494255 PIN4Q9Y237 131 aaKnown RBP13.78□□□□□ -0.2
TRA2A-209ENST00000494255 A0A1W2PQ27 194 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 A0A1W2PQ64 194 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 A0A1W2PQD8 194 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 SFI1A8K8P3 1242 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 GRXCR1A8MXD5 290 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 UPP2O95045 317 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 STAG3L1P0CL83 205 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 PLS3P13797 630 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 AXLP30530 894 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 NPTX2P47972 431 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 AMPD3Q01432 767 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
TRA2A-209ENST00000494255 MBTD1Q05BQ5 628 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 GIT2Q14161 759 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 DSC3Q14574 896 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 RAB30Q15771 203 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 E2F4Q16254 413 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 FAM117BQ6P1L5 589 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 SLC24A5Q71RS6 500 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 RTN4RL1Q86UN2 441 aaPredicted RBP13.77□□□□□ -0.21
TRA2A-209ENST00000494255 CEP57L1Q8IYX8 460 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 LINC01599Q8WXQ3 324 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 TNMDQ9H2S6 317 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 ZHX3Q9H4I2 956 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 KMT5AQ9NQR1 393 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 RGS18Q9NS28 235 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 AGPAT5Q9NUQ2 364 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 PRMT7Q9NVM4 692 aaPredicted RBP13.77□□□□□ -0.21
TRA2A-209ENST00000494255 LRFN2Q9ULH4 789 aa13.77□□□□□ -0.21
TRA2A-209ENST00000494255 PTPRSQ13332 1948 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 PHLPP2Q6ZVD8 1323 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 A0A1B0GVL5 298 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 PFKFB1P16118 471 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 LIG1P18858 919 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 IBSPP21815 317 aaPredicted RBP13.76□□□□□ -0.21
TRA2A-209ENST00000494255 SARSP49591 514 aaKnown RBP13.76□□□□□ -0.21
TRA2A-209ENST00000494255 MAPK6Q16659 721 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 TWF2Q6IBS0 349 aaKnown RBP13.76□□□□□ -0.21
TRA2A-209ENST00000494255 DYMQ7RTS9 669 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 NPAS4Q8IUM7 802 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 MYCT1Q8N699 235 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 FSIP1Q8NA03 581 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 MRPS27Q92552 414 aaKnown RBP13.76□□□□□ -0.21
TRA2A-209ENST00000494255 DDX12PQ92771 950 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 TOP1MTQ969P6 601 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 KIFC3Q9BVG8 833 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 PARVGQ9HBI0 331 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 PCDHA11Q9Y5I1 949 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 TRIOBPQ9H2D6 2365 aa13.76□□□□□ -0.21
TRA2A-209ENST00000494255 MYMKA6NI61 221 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 C9IYK1 514 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 H0YCG3 227 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 K7ERI5 159 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 TLL1O43897 1013 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 GJB5O95377 273 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 PRKCBP05771 671 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 RABGGTBP53611 331 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 TMEM132AQ24JP5 1023 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 NOTUMQ6P988 496 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 TMCO2Q7Z6W1 182 aaPredicted RBP13.75□□□□□ -0.21
TRA2A-209ENST00000494255 SPIRE2Q8WWL2 714 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 PRIMPOLQ96LW4 560 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 KBTBD4Q9NVX7 518 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 USP25Q9UHP3 1055 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 PCDHB7Q9Y5E2 793 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 TTC3P53804 2025 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 GBF1Q92538 1859 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 SOX1O00570 391 aaPredicted RBP13.75□□□□□ -0.21
TRA2A-209ENST00000494255 SLC16A4O15374 487 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 TSPAN1O60635 241 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 SKIP12755 728 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 IDEP14735 1019 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 SYKP43405 635 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 ZNF131P52739 623 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 FAM187BQ17R55 369 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 CCDC51Q96ER9 411 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 YME1L1Q96TA2 773 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 RAD9AQ99638 391 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 HPSEQ9Y251 543 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 INSL6Q9Y581 213 aa13.75□□□□□ -0.21
TRA2A-209ENST00000494255 ADGRA3Q8IWK6 1321 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 CNTNAP2Q9UHC6 1331 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 SLFN14P0C7P3 912 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 GAP43P17677 238 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 DNAJB2P25686 324 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 PBX2P40425 430 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 RAB27AP51159 221 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms