RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 LRRC55Q6ZSA7 311 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 KCNK18Q7Z418 384 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 ZNF598Q86UK7 904 aaKnown RBP16.32■□□□□ 0.2
ATG4B-224ENST00000494132 CDR2LQ86X02 465 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-224ENST00000494132 ABI1Q8IZP0 508 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 KLHL23Q8NBE8 558 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 BSNDQ8WZ55 320 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 CASD1Q96PB1 797 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 MMTAG2Q9BU76 263 aaKnown RBP16.32■□□□□ 0.2
ATG4B-224ENST00000494132 C11orf84Q9BUA3 381 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-224ENST00000494132 TMEM117Q9H0C3 514 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 CHST12Q9NRB3 414 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 FAM105AQ9NUU6 356 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 LMCD1Q9NZU5 365 aa16.32■□□□□ 0.2
ATG4B-224ENST00000494132 TSPAN1O60635 241 aa16.31■□□□□ 0.2
ATG4B-224ENST00000494132 ERLIN2O94905 339 aa16.31■□□□□ 0.2
ATG4B-224ENST00000494132 RB1P06400 928 aa16.31■□□□□ 0.2
ATG4B-224ENST00000494132 DNAJB1P25685 340 aa16.31■□□□□ 0.2
ATG4B-224ENST00000494132 HOXA11P31270 313 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-224ENST00000494132 MBTD1Q05BQ5 628 aa16.31■□□□□ 0.2
ATG4B-224ENST00000494132 CWH43Q9H720 699 aa16.31■□□□□ 0.2
ATG4B-224ENST00000494132 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-224ENST00000494132 PLAGL2Q9UPG8 496 aa16.31■□□□□ 0.2
ATG4B-224ENST00000494132 INPP5FQ9Y2H2 1132 aa16.31■□□□□ 0.2
ATG4B-224ENST00000494132 SPTBN5Q9NRC6 3674 aaKnown RBP16.3■□□□□ 0.2
ATG4B-224ENST00000494132 B4GALT5O43286 388 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 LIG1P18858 919 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 CYP11B2P19099 503 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 PDCP20941 246 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 GRIN1Q05586 938 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
ATG4B-224ENST00000494132 PTPROQ16827 1216 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 TCEAL5Q5H9L2 206 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 UBXN11Q5T124 520 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 BRAPQ7Z569 592 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 LRRC43Q8N309 656 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 COLGALT1Q8NBJ5 622 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 MCPH1Q8NEM0 835 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
ATG4B-224ENST00000494132 PNMA5Q96PV4 448 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 KIFC3Q9BVG8 833 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 EIF2AQ9BY44 585 aaKnown RBP16.3■□□□□ 0.2
ATG4B-224ENST00000494132 USP20Q9Y2K6 914 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 PCDHB2Q9Y5E7 798 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 PCDHGC5Q9Y5F6 944 aa16.3■□□□□ 0.2
ATG4B-224ENST00000494132 DLL1O00548 723 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 HOXA2O43364 376 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 EOMESO95936 686 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 MUTP22033 750 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 IRS1P35568 1242 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 KCNQ1P51787 676 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 CEBPZQ03701 1054 aaKnown RBP16.29■□□□□ 0.2
ATG4B-224ENST00000494132 RESTQ13127 1097 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 CAMK1Q14012 370 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 AMHR2Q16671 573 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 TIGD5Q53EQ6 642 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 FAM43BQ6ZT52 329 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-224ENST00000494132 EP400NLQ6ZTU2 488 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 HSCBQ8IWL3 235 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 THNSL1Q8IYQ7 743 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 SPRYD3Q8NCJ5 442 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 SPPL3Q8TCT6 385 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 POF1BQ8WVV4 589 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 SNX21Q969T3 373 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 APOL6Q9BWW8 343 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 PLVAPQ9BX97 442 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 COL25A1Q9BXS0 654 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-224ENST00000494132 MTMR6Q9Y217 621 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 PCDHB12Q9Y5F1 795 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 CLIC4Q9Y696 253 aa16.29■□□□□ 0.2
ATG4B-224ENST00000494132 NT5C1B-RDH14C9J2C7 533 aa16.28■□□□□ 0.2
ATG4B-224ENST00000494132 EYA4O95677 639 aa16.28■□□□□ 0.2
ATG4B-224ENST00000494132 SSBP05455 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATG4B-224ENST00000494132 ARF4P18085 180 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-224ENST00000494132 GTF2F1P35269 517 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATG4B-224ENST00000494132 RAB27AP51159 221 aa16.28■□□□□ 0.2
ATG4B-224ENST00000494132 RAD51AP2Q09MP3 1159 aa16.28■□□□□ 0.2
ATG4B-224ENST00000494132 FOXD4L5Q5VV16 416 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-224ENST00000494132 ARL6IP4Q66PJ3 421 aaKnown RBP16.28■□□□□ 0.2
ATG4B-224ENST00000494132 IFNLR1Q8IU57 520 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-224ENST00000494132 FOXD4L4Q8WXT5 416 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-224ENST00000494132 P2RX5Q93086 422 aa16.28■□□□□ 0.2
ATG4B-224ENST00000494132 HLA-CQ95604 372 aa16.28■□□□□ 0.2
ATG4B-224ENST00000494132 RUSC1Q9BVN2 902 aa16.28■□□□□ 0.2
ATG4B-224ENST00000494132 TRAIPQ9BWF2 469 aa16.28■□□□□ 0.2
ATG4B-224ENST00000494132 NSUN3Q9H649 340 aaKnown RBP16.28■□□□□ 0.2
ATG4B-224ENST00000494132 DNM3Q9UQ16 869 aa16.28■□□□□ 0.2
ATG4B-224ENST00000494132 HES2Q9Y543 173 aa16.28■□□□□ 0.2
ATG4B-224ENST00000494132 TTLL13PA6NNM8 815 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 STX6O43752 255 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 FGF18O76093 207 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 EDN1P05305 212 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 LAG3P18627 525 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 AFF1P51825 1210 aaKnown RBP16.27■□□□□ 0.2
ATG4B-224ENST00000494132 MRPS5P82675 430 aaKnown RBP16.27■□□□□ 0.2
ATG4B-224ENST00000494132 KCNT2Q6UVM3 1135 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 AGMOQ6ZNB7 445 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 ADGRD2Q7Z7M1 963 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 CABP7Q86V35 215 aa16.27■□□□□ 0.2
ATG4B-224ENST00000494132 SMG8Q8ND04 991 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms