RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 CATSPER4Q7RTX7 472 aa14.97□□□□□ -0.01
CTDSP1-212ENST00000494067 CCDC83Q8IWF9 413 aa14.97□□□□□ -0.01
CTDSP1-212ENST00000494067 C4orf19Q8IY42 314 aa14.97□□□□□ -0.01
CTDSP1-212ENST00000494067 HELQQ8TDG4 1101 aa14.97□□□□□ -0.01
CTDSP1-212ENST00000494067 TCP11Q8WWU5 503 aa14.97□□□□□ -0.01
CTDSP1-212ENST00000494067 LPPQ93052 612 aa14.97□□□□□ -0.01
CTDSP1-212ENST00000494067 MSLNLQ96KJ4 702 aa14.97□□□□□ -0.01
CTDSP1-212ENST00000494067 NGRNQ9NPE2 291 aaKnown RBP14.97□□□□□ -0.01
CTDSP1-212ENST00000494067 XPNPEP1Q9NQW7 623 aa14.97□□□□□ -0.01
CTDSP1-212ENST00000494067 SPG21Q9NZD8 308 aa14.97□□□□□ -0.01
CTDSP1-212ENST00000494067 PIN4Q9Y237 131 aaKnown RBP14.97□□□□□ -0.01
CTDSP1-212ENST00000494067 FSCN2O14926 492 aa14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 PER2O15055 1255 aa14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 DCXO43602 365 aa14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 YWHABP31946 246 aaKnown RBP14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 RAB27AP51159 221 aa14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 TMC7Q7Z402 723 aa14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 TMEM173Q86WV6 379 aaPredicted RBP14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 TMEM87AQ8NBN3 555 aa14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 PSPC1Q8WXF1 523 aaKnown RBP14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 PGBD4Q96DM1 585 aa14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 MTMR9Q96QG7 549 aa14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 TCF25Q9BQ70 676 aa14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 EIF2AK1Q9BQI3 630 aaKnown RBP14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 ZSWIM4Q9H7M6 989 aa14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 BARX2Q9UMQ3 279 aaPredicted RBP14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 PCDHA12Q9UN75 941 aa14.96□□□□□ -0.01
CTDSP1-212ENST00000494067 FAM86C2PA6NEL3 165 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 PRR33A8MZF0 331 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 ASAP2O43150 1006 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 EYA4O95677 639 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 CA8P35219 290 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 PHKA2P46019 1235 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 AFF1P51825 1210 aaKnown RBP14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 NCBP1Q09161 790 aaKnown RBP14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 COASYQ13057 564 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 SAFBQ15424 915 aaKnown RBP eCLIP14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 PLPP4Q5VZY2 271 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 GLB1LQ6UWU2 654 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 BCL7CQ8WUZ0 217 aaPredicted RBP14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 PRPF31Q8WWY3 499 aaKnown RBP14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 FAM122AQ96E09 287 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 CCDC43Q96MW1 224 aaKnown RBP14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 HSD17B14Q9BPX1 270 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 TRAIPQ9BWF2 469 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 COL4A3BPQ9Y5P4 624 aa14.95□□□□□ -0.02
CTDSP1-212ENST00000494067 POTEMA6NI47 508 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 C19orf67A6NJJ6 358 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 HIDE1A8MVS5 230 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 NT5C1B-RDH14C9J2C7 533 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 SRGAP2CP0DJJ0 459 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 HOXA11P31270 313 aaPredicted RBP14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 RNASELQ05823 741 aaKnown RBP14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 LAMTOR4Q0VGL1 99 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 KCNC3Q14003 757 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 SMC1AQ14683 1233 aaKnown RBP14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 EMC2Q15006 297 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 CALCRLQ16602 461 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 DUSP6Q16828 381 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 XKR9Q5GH70 373 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 UBXN11Q5T124 520 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 SRGAP1Q7Z6B7 1085 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 TPH2Q8IWU9 490 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 SMRP1Q8NCR6 262 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 TMEM169Q96HH4 297 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 TTC12Q9H892 705 aaPredicted RBP14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 FAM105AQ9NUU6 356 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 LIMCH1Q9UPQ0 1083 aa14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 ARIH1Q9Y4X5 557 aaPredicted RBP14.94□□□□□ -0.02
CTDSP1-212ENST00000494067 NEMFO60524 1076 aa14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 SPATA31C1P0DKV0 1188 aa14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 TXKP42681 527 aa14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 TFDP1Q14186 410 aa14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 MXD4Q14582 209 aaPredicted RBP14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 NBR1Q14596 966 aa14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 AGMOQ6ZNB7 445 aa14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 SLC39A11Q8N1S5 342 aa14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 URGCPQ8TCY9 931 aa14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 ASAP3Q8TDY4 903 aa14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 MTRQ99707 1265 aa14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 AGPAT5Q9NUQ2 364 aa14.93□□□□□ -0.02
CTDSP1-212ENST00000494067 ERLIN2O94905 339 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 LYPLA2O95372 231 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 ATP2B1P20020 1258 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 MCM7P33993 719 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 TECP42680 631 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 BCAR1P56945 870 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 GIT2Q14161 759 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 PCBP1Q15365 356 aaKnown RBP eCLIP14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 NOMO2Q5JPE7 1267 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 FERMT3Q86UX7 667 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 CNNM3Q8NE01 707 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 FEZF2Q8TBJ5 459 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 PIGOQ8TEQ8 1089 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 CASP10Q92851 521 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 FAM193BQ96PV7 902 aaPredicted RBP14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 VN1R3Q9BXE9 311 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 KANSL3Q9P2N6 904 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 DNAJB4Q9UDY4 337 aa14.92□□□□□ -0.02
CTDSP1-212ENST00000494067 STK39Q9UEW8 545 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms