RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 GSDMAQ96QA5 445 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 PLVAPQ9BX97 442 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 PARD6BQ9BYG5 372 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 IFIH1Q9BYX4 1025 aaKnown RBP11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 RASSF4Q9H2L5 321 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 ZNF287Q9HBT7 754 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 MAN1B1Q9UKM7 699 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 NFE2L3Q9Y4A8 694 aa11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 SRPRBQ9Y5M8 271 aaKnown RBP11.73□□□□□ -0.53
PDLIM1-205ENST00000493949 CTAGE9A4FU28 777 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 A6NNZ2 444 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 GOLGA8AA7E2F4 631 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 B4DLN1 442 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 DEXIO95424 95 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 PCP11498 1178 aaKnown RBP11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 PBX1P40424 430 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 MRPL12P52815 198 aaKnown RBP11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 PNOCQ13519 176 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 PUM1Q14671 1186 aaKnown RBP eCLIP11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 NTRK3Q16288 839 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 TUBB8Q3ZCM7 444 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 HSP90B2PQ58FF3 399 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 TTBK2Q6IQ55 1244 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 SLC30A10Q6XR72 485 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 CCDC12Q8WUD4 166 aaPredicted RBP11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 EMID1Q96A84 441 aaPredicted RBP11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 INTS13Q9NVM9 706 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 FBXO2Q9UK22 296 aaPredicted RBP11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 PLAGL2Q9UPG8 496 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 PKD1L2Q7Z442 2459 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 KAT6AQ92794 2004 aa11.72□□□□□ -0.53
PDLIM1-205ENST00000493949 ADGRA3Q8IWK6 1321 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 TARSL2A2RTX5 802 aaKnown RBP11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 FAM205CA6NFA0 338 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 ERICH4A6NGS2 130 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 MFAP3LO75121 409 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 CAND2O75155 1236 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 HOXD8P13378 290 aaPredicted RBP11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 SLC16A2P36021 539 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 TDO2P48775 406 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 FOSBP53539 338 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 ZNF200P98182 395 aaPredicted RBP11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 TFAP4Q01664 338 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 HIC1Q14526 733 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 MFSD10Q14728 455 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 KIAA0753Q2KHM9 967 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 NAALADL2Q58DX5 795 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 CDKAL1Q5VV42 579 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 RNF207Q6ZRF8 634 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 UBALD2Q8IYN6 164 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 FAM177A1Q8N128 213 aaPredicted RBP11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 CLEC4DQ8WXI8 215 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 APBB2Q92870 758 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 HS3ST6Q96QI5 342 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 RNF41Q9H4P4 317 aaPredicted RBP11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 DLL3Q9NYJ7 618 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 ADGRG1Q9Y653 693 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 DOCK5Q9H7D0 1870 aa11.71□□□□□ -0.53
PDLIM1-205ENST00000493949 DTNBO60941 627 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 TSPY3P0CV98 308 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 TSPY8P0CW00 308 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 HOXC8P31273 242 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 THPOP40225 353 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 AARSP49588 968 aaKnown RBP eCLIP11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 CLCN5P51795 746 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 RPS6P62753 249 aaKnown RBP11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 CKAP4Q07065 602 aaKnown RBP11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 LONRF3Q496Y0 759 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 BEND6Q5SZJ8 279 aaPredicted RBP11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 IQCEQ6IPM2 695 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 BTNL9Q6UXG8 535 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 ADGRD2Q7Z7M1 963 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 SPPL3Q8TCT6 385 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 IGDCC4Q8TDY8 1250 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 ATP8B4Q8TF62 1192 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 BBXQ8WY36 941 aaPredicted RBP11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 ZNF689Q96CS4 500 aaPredicted RBP11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 NAPGQ99747 312 aaPredicted RBP11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 RNF26Q9BY78 433 aaPredicted RBP11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 SEMA4AQ9H3S1 761 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 LY9Q9HBG7 655 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 IL17RBQ9NRM6 502 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 RMND1Q9NWS8 449 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 FEZ2Q9UHY8 353 aaPredicted RBP11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 ADAM21Q9UKJ8 722 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 PNMA2Q9UL42 364 aa11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 BARX2Q9UMQ3 279 aaPredicted RBP11.7□□□□□ -0.54
PDLIM1-205ENST00000493949 CTAGE15A4D2H0 777 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 LRRC10BA6NIK2 292 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 ACTN4O43707 911 aaKnown RBP11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 SASH3O75995 380 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 APPP05067 770 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 MYL1P05976 194 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 CTAGE8P0CG41 777 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 DNAJB1P25685 340 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 CALML3P27482 149 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 MARCKSP29966 332 aaPredicted RBP11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 PPP1R2P41236 205 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 LY6KQ17RY6 165 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms