RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ZNF200P98182 395 aaPredicted RBP13.62□□□□□ -0.23
UPF3A-210ENST00000493727 ORC2Q13416 577 aaPredicted RBP13.62□□□□□ -0.23
UPF3A-210ENST00000493727 MRPL14Q6P1L8 145 aaKnown RBP13.62□□□□□ -0.23
UPF3A-210ENST00000493727 CYFIP1Q7L576 1253 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.62□□□□□ -0.23
UPF3A-210ENST00000493727 WNT8BQ93098 351 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 GPR20Q99678 358 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 CYLDQ9NQC7 956 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 RTEL1Q9NZ71 1219 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 MTUS1Q9ULD2 1270 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 MYH15Q9Y2K3 1946 aa13.62□□□□□ -0.23
UPF3A-210ENST00000493727 RALGAPA2Q2PPJ7 1873 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 AMHP03971 560 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 IL9P15248 144 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 SCTRP47872 440 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 NASPP49321 788 aaPredicted RBP13.61□□□□□ -0.23
UPF3A-210ENST00000493727 SETQ01105 290 aaPredicted RBP13.61□□□□□ -0.23
UPF3A-210ENST00000493727 CALCRLQ16602 461 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 PRR16Q569H4 304 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 PLEKHG4Q58EX7 1191 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 PPP4R3AQ6IN85 833 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 MOXD1Q6UVY6 613 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 GJD3Q8N144 294 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 KCNG4Q8TDN1 519 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 LEO1Q8WVC0 666 aaPredicted RBP13.61□□□□□ -0.23
UPF3A-210ENST00000493727 GPRASP2Q96D09 838 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 UCN2Q96RP3 112 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 RNPEPQ9H4A4 650 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 INSL6Q9Y581 213 aa13.61□□□□□ -0.23
UPF3A-210ENST00000493727 CYP3A7-CYP3A51PA0A087WV96 503 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 SPTLC2O15270 562 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 TREHO43280 583 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 SLC37A4O43826 429 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 OR52Z1P0C646 297 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 KCNA5P22460 613 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 CYP3A7P24462 503 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 MARCKSP29966 332 aaPredicted RBP13.6□□□□□ -0.23
UPF3A-210ENST00000493727 CIITAP33076 1130 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 ME1P48163 572 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 HTRA4P83105 476 aaPredicted RBP13.6□□□□□ -0.23
UPF3A-210ENST00000493727 CEP55Q53EZ4 464 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 PLA2G4DQ86XP0 818 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 LINC00301Q8NCQ3 95 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 DBF4BQ8NFT6 615 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 NEK9Q8TD19 979 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 CRYGNQ8WXF5 182 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 SEPT8Q92599 483 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 APBB2Q92870 758 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 MXRA8Q9BRK3 442 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 NRCAMQ92823 1304 aa13.6□□□□□ -0.23
UPF3A-210ENST00000493727 USP34Q70CQ2 3546 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 GOLGA6L4A6NEF3 574 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 FAM86B1E9PN63 330 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 LAD1O00515 517 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 MAFGO15525 162 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 FAM86B2P0C5J1 330 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 ATP2C1P98194 919 aaPredicted RBP13.59□□□□□ -0.23
UPF3A-210ENST00000493727 SLC39A14Q15043 492 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 Q4G0T1 1027 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 UTP14CQ5TAP6 766 aaKnown RBP13.59□□□□□ -0.23
UPF3A-210ENST00000493727 MYOCDQ8IZQ8 938 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 KDF1Q8NAX2 398 aaPredicted RBP13.59□□□□□ -0.23
UPF3A-210ENST00000493727 SAMD11Q96NU1 681 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 C17orf80Q9BSJ5 609 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 GMPR2Q9P2T1 348 aaKnown RBP13.59□□□□□ -0.23
UPF3A-210ENST00000493727 DOLKQ9UPQ8 538 aa13.59□□□□□ -0.23
UPF3A-210ENST00000493727 TECTAO75443 2155 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 EDIL3O43854 480 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 RPLP2P05387 115 aaKnown RBP13.58□□□□□ -0.24
UPF3A-210ENST00000493727 MTMR1Q13613 665 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 COL19A1Q14993 1142 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 PTPAQ15257 358 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 TMEM266Q2M3C6 531 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 FAM26DQ5JW98 314 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 FAM117BQ6P1L5 589 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 TAF2Q6P1X5 1199 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.58□□□□□ -0.24
UPF3A-210ENST00000493727 CLEC17AQ6ZS10 378 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 NIPA1Q7RTP0 329 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 RSPH3Q86UC2 560 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 PLPP7Q8NBV4 271 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 CYP2W1Q8TAV3 490 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 MRPL38Q96DV4 380 aaKnown RBP13.58□□□□□ -0.24
UPF3A-210ENST00000493727 MBOAT7Q96N66 472 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 TMEM60Q9H2L4 133 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 BCAS3Q9H6U6 928 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 JADE2Q9NQC1 790 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 SETD4Q9NVD3 440 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 TCEAL9Q9UHQ7 104 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 RCOR1Q9UKL0 485 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 UBIAD1Q9Y5Z9 338 aa13.58□□□□□ -0.24
UPF3A-210ENST00000493727 MEIS1O00470 390 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 PPP6R2O75170 966 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
UPF3A-210ENST00000493727 ADH1AP07327 375 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 ITGB5P18084 799 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 TCF7P36402 384 aaPredicted RBP13.57□□□□□ -0.24
UPF3A-210ENST00000493727 ADAM17P78536 824 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 SP4Q02446 784 aa13.57□□□□□ -0.24
UPF3A-210ENST00000493727 MAP7D1Q3KQU3 841 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms