RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 NFX1Q12986 1120 aaKnown RBP17.36■□□□□ 0.37
HPS4-216ENST00000493455 KLHL40Q2TBA0 621 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 ZC2HC1CQ53FD0 456 aaPredicted RBP17.36■□□□□ 0.37
HPS4-216ENST00000493455 L1TD1Q5T7N2 865 aaKnown RBP17.36■□□□□ 0.37
HPS4-216ENST00000493455 CNNM4Q6P4Q7 775 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 CATSPER4Q7RTX7 472 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 HAUS6Q7Z4H7 955 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 RPAINQ86UA6 219 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 GLIS3Q8NEA6 775 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 C2orf40Q9H1Z8 148 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 MINDY3Q9H8M7 445 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 C17orf75Q9HAS0 396 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 IFT122Q9HBG6 1241 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 USP20Q9Y2K6 914 aa17.36■□□□□ 0.37
HPS4-216ENST00000493455 NOC2LQ9Y3T9 749 aaKnown RBP17.36■□□□□ 0.37
HPS4-216ENST00000493455 LTBP2Q14767 1821 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 ERLIN2O94905 339 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 PRKCBP05771 671 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 DARSP14868 501 aaKnown RBP17.35■□□□□ 0.37
HPS4-216ENST00000493455 CD52P31358 61 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 CASP5P51878 434 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 NCKAP1LP55160 1127 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 RBL2Q08999 1139 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 PAK2Q13177 524 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 LPIN1Q14693 890 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 MBTPS1Q14703 1052 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 SKOR2Q2VWA4 1001 aaPredicted RBP17.35■□□□□ 0.37
HPS4-216ENST00000493455 FAM26DQ5JW98 314 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 FBXO47Q5MNV8 452 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 TRAF7Q6Q0C0 670 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 SRGAP1Q7Z6B7 1085 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 SMYD4Q8IYR2 804 aaPredicted RBP17.35■□□□□ 0.37
HPS4-216ENST00000493455 SPIRE2Q8WWL2 714 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 BADQ92934 168 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 BICD1Q96G01 975 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 RMND1Q9NWS8 449 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 SEL1LQ9UBV2 794 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 MAN1B1Q9UKM7 699 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 GDAQ9Y2T3 454 aa17.35■□□□□ 0.37
HPS4-216ENST00000493455 K7ERI5 159 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 NBNO60934 754 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 PRPF6O94906 941 aaKnown RBP17.34■□□□□ 0.37
HPS4-216ENST00000493455 SFPQP23246 707 aaKnown RBP eCLIP17.34■□□□□ 0.37
HPS4-216ENST00000493455 EIF4BP23588 611 aaKnown RBP17.34■□□□□ 0.37
HPS4-216ENST00000493455 MBTD1Q05BQ5 628 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 STRN3Q13033 797 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 CDCA2Q69YH5 1023 aaPredicted RBP17.34■□□□□ 0.37
HPS4-216ENST00000493455 PHLPP2Q6ZVD8 1323 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 FAM228AQ86W67 206 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 NELFCDQ8IXH7 590 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 ELOA2Q8IYF1 753 aaPredicted RBP17.34■□□□□ 0.37
HPS4-216ENST00000493455 TMEM199Q8N511 208 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 TMEM161BQ8NDZ6 487 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 GSDMAQ96QA5 445 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 KIAA1468Q9P260 1216 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 KCNG1Q9UIX4 513 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 MAPK8IP1Q9UQF2 711 aa17.34■□□□□ 0.37
HPS4-216ENST00000493455 H0YCG3 227 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 B4GALT5O43286 388 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 RHOBTB3O94955 611 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 ACRP10323 421 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 MAPTP10636 758 aaKnown RBP17.33■□□□□ 0.36
HPS4-216ENST00000493455 CSF2RAP15509 400 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 EFNA5P52803 228 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 STK4Q13043 487 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 KCNB1Q14721 858 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 MAPK6Q16659 721 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 TSHZ1Q6ZSZ6 1077 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 STXBP4Q6ZWJ1 553 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 ZNF710Q8N1W2 664 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 CPB2Q96IY4 423 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 FIZ1Q96SL8 496 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 AGO3Q9H9G7 860 aaKnown RBP17.33■□□□□ 0.36
HPS4-216ENST00000493455 OLFML3Q9NRN5 406 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 ARHGAP28Q9P2N2 729 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 ST3GAL5Q9UNP4 418 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 NR2E3Q9Y5X4 410 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 TET1Q8NFU7 2136 aa17.33■□□□□ 0.36
HPS4-216ENST00000493455 MATR3P43243 847 aaKnown RBP eCLIP17.32■□□□□ 0.36
HPS4-216ENST00000493455 PSMD2Q13200 908 aa17.32■□□□□ 0.36
HPS4-216ENST00000493455 PRPF4BQ13523 1007 aaKnown RBP17.32■□□□□ 0.36
HPS4-216ENST00000493455 MFSD5Q6N075 450 aa17.32■□□□□ 0.36
HPS4-216ENST00000493455 TAS1R3Q7RTX0 852 aa17.32■□□□□ 0.36
HPS4-216ENST00000493455 ZNF720Q7Z2F6 126 aa17.32■□□□□ 0.36
HPS4-216ENST00000493455 CDR2LQ86X02 465 aaPredicted RBP17.32■□□□□ 0.36
HPS4-216ENST00000493455 SYCP3Q8IZU3 236 aa17.32■□□□□ 0.36
HPS4-216ENST00000493455 KIAA0895Q8NCT3 520 aa17.32■□□□□ 0.36
HPS4-216ENST00000493455 LBHD1Q9BQE6 289 aaPredicted RBP17.32■□□□□ 0.36
HPS4-216ENST00000493455 IFIH1Q9BYX4 1025 aaKnown RBP17.32■□□□□ 0.36
HPS4-216ENST00000493455 PRMT7Q9NVM4 692 aaPredicted RBP17.32■□□□□ 0.36
HPS4-216ENST00000493455 PADI3Q9ULW8 664 aa17.32■□□□□ 0.36
HPS4-216ENST00000493455 PIN4Q9Y237 131 aaKnown RBP17.32■□□□□ 0.36
HPS4-216ENST00000493455 PCDHB13Q9Y5F0 798 aa17.32■□□□□ 0.36
HPS4-216ENST00000493455 GPR182O15218 404 aa17.31■□□□□ 0.36
HPS4-216ENST00000493455 EDN1P05305 212 aa17.31■□□□□ 0.36
HPS4-216ENST00000493455 HARSP12081 509 aaKnown RBP17.31■□□□□ 0.36
HPS4-216ENST00000493455 SARSP49591 514 aaKnown RBP17.31■□□□□ 0.36
HPS4-216ENST00000493455 FPGSQ05932 587 aa17.31■□□□□ 0.36
HPS4-216ENST00000493455 POU5F1BQ06416 359 aa17.31■□□□□ 0.36
HPS4-216ENST00000493455 EHHADHQ08426 723 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms