RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 ITGB3BPQ13352 177 aaPredicted RBP6.51□□□□□ -1.37
A1CF-210ENST00000493415 COL9A3Q14050 684 aaPredicted RBP6.51□□□□□ -1.37
A1CF-210ENST00000493415 LPAL2Q16609 132 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 PHLDB3Q6NSJ2 640 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 SWSAP1Q6NVH7 229 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 EFCAB12Q6NXP0 572 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 CASC1Q6TDU7 716 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 C15orf39Q6ZRI6 1047 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 PRR23BQ6ZRT6 265 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 TICAM2Q86XR7 235 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 RAB11FIP4Q86YS3 637 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 ZNF654Q8IZM8 581 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 CMTR1Q8N1G2 835 aaKnown RBP6.51□□□□□ -1.37
A1CF-210ENST00000493415 SLC44A3Q8N4M1 653 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 CCDC82Q8N4S0 544 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 PDCD7Q8N8D1 485 aaKnown RBP6.51□□□□□ -1.37
A1CF-210ENST00000493415 NCOA7Q8NI08 942 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 BCL7CQ8WUZ0 217 aaPredicted RBP6.51□□□□□ -1.37
A1CF-210ENST00000493415 NRDE2Q9H7Z3 1164 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 AGO4Q9HCK5 861 aaKnown RBP6.51□□□□□ -1.37
A1CF-210ENST00000493415 MRPL17Q9NRX2 175 aaKnown RBP6.51□□□□□ -1.37
A1CF-210ENST00000493415 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 NUMBLQ9Y6R0 609 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 ACACBO00763 2458 aa6.51□□□□□ -1.37
A1CF-210ENST00000493415 DOCK6Q96HP0 2047 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 A0A0U1RQF3 1178 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.5□□□□□ -1.37
A1CF-210ENST00000493415 CCDC69A6NI79 296 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 MAGEB2O15479 319 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 CSDE1O75534 798 aaKnown RBP6.5□□□□□ -1.37
A1CF-210ENST00000493415 RFPL2O75678 378 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 DDAH1O94760 285 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 CCNE2O96020 404 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 GALTP07902 379 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 GLULP15104 373 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 RXRAP19793 462 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 EIF4BP23588 611 aaKnown RBP6.5□□□□□ -1.37
A1CF-210ENST00000493415 SLC11A1P49279 550 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 NAPAP54920 295 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 SPEM2Q0P670 501 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 TROAPQ12815 778 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 SNW1Q13573 536 aaKnown RBP6.5□□□□□ -1.37
A1CF-210ENST00000493415 MLF2Q15773 248 aaPredicted RBP6.5□□□□□ -1.37
A1CF-210ENST00000493415 CEP55Q53EZ4 464 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 NOMO2Q5JPE7 1267 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 B4GALNT3Q6L9W6 998 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 TSSK4Q6SA08 328 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 PLA2G4DQ86XP0 818 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 GLYCTKQ8IVS8 523 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 NXPE3Q969Y0 559 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 LZTS2Q9BRK4 669 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 ANO3Q9BYT9 981 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 WDR6Q9NNW5 1121 aaKnown RBP6.5□□□□□ -1.37
A1CF-210ENST00000493415 TBC1D13Q9NVG8 400 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 DLGAP2Q9P1A6 1054 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 EPS15L1Q9UBC2 864 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 GABBR1Q9UBS5 961 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 DNAJB4Q9UDY4 337 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 FBXO4Q9UKT5 387 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 PIN4Q9Y237 131 aaKnown RBP6.5□□□□□ -1.37
A1CF-210ENST00000493415 PRG3Q9Y2Y8 225 aaPredicted RBP6.5□□□□□ -1.37
A1CF-210ENST00000493415 PCDHGA2Q9Y5H1 932 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 IRAK3Q9Y616 596 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.5□□□□□ -1.37
A1CF-210ENST00000493415 DNAH14Q0VDD8 3507 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 KMT2BQ9UMN6 2715 aaPredicted RBP6.5□□□□□ -1.37
A1CF-210ENST00000493415 EPG5Q9HCE0 2579 aa6.5□□□□□ -1.37
A1CF-210ENST00000493415 KANSL1LA0AUZ9 987 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 FAM170BA6NMN3 283 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 ZBTB42B2RXF5 422 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 PSAPP07602 524 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 SPATA31D3P0C874 917 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 SKIP12755 728 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 DARSP14868 501 aaKnown RBP6.49□□□□□ -1.37
A1CF-210ENST00000493415 SFPQP23246 707 aaKnown RBP eCLIP6.49□□□□□ -1.37
A1CF-210ENST00000493415 PHKA2P46019 1235 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 GPC3P51654 580 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 ADCY7P51828 1080 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 HTR4Q13639 388 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 ZNF528Q3MIS6 628 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 ABHD15Q6UXT9 468 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 SPATA31D4Q6ZUB0 917 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 ZNF598Q86UK7 904 aaKnown RBP6.49□□□□□ -1.37
A1CF-210ENST00000493415 CMASQ8NFW8 434 aaPredicted RBP6.49□□□□□ -1.37
A1CF-210ENST00000493415 NETO1Q8TDF5 533 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 FAM167AQ96KS9 214 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 HERC2P3Q9BVR0 1158 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 GCOM2Q9BZD3 368 aaPredicted RBP6.49□□□□□ -1.37
A1CF-210ENST00000493415 FAM105AQ9NUU6 356 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 ZSCAN32Q9NX65 697 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 STK39Q9UEW8 545 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 ANGPTL2Q9UKU9 493 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 POLIQ9UNA4 740 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 SSX2IPQ9Y2D8 614 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 FAN1Q9Y2M0 1017 aa6.49□□□□□ -1.37
A1CF-210ENST00000493415 ZNF292O60281 2723 aa6.48□□□□□ -1.37
A1CF-210ENST00000493415 PDCD11Q14690 1871 aaKnown RBP6.48□□□□□ -1.37
A1CF-210ENST00000493415 IGKV6D-21A0A0A0MT36 114 aa6.48□□□□□ -1.37
A1CF-210ENST00000493415 MEIS3P2A8K0S8 358 aa6.48□□□□□ -1.37
A1CF-210ENST00000493415 E7EWF7 191 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms