RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 FOSBP53539 338 aa24.77■■□□□ 1.56
LYSMD4-208ENST00000493256 CYP4A11Q02928 519 aa24.77■■□□□ 1.56
LYSMD4-208ENST00000493256 CTTNQ14247 550 aaKnown RBP24.77■■□□□ 1.56
LYSMD4-208ENST00000493256 LONRF3Q496Y0 759 aa24.77■■□□□ 1.56
LYSMD4-208ENST00000493256 EXOC8Q8IYI6 725 aa24.77■■□□□ 1.56
LYSMD4-208ENST00000493256 PSPC1Q8WXF1 523 aaKnown RBP24.77■■□□□ 1.56
LYSMD4-208ENST00000493256 ZSWIM4Q9H7M6 989 aa24.77■■□□□ 1.56
LYSMD4-208ENST00000493256 FAM105AQ9NUU6 356 aa24.77■■□□□ 1.56
LYSMD4-208ENST00000493256 MEIS3P2A8K0S8 358 aa24.76■■□□□ 1.55
LYSMD4-208ENST00000493256 BTBD18B2RXH4 712 aa24.76■■□□□ 1.55
LYSMD4-208ENST00000493256 ZBTB39O15060 712 aa24.76■■□□□ 1.55
LYSMD4-208ENST00000493256 SEC24BO95487 1268 aa24.76■■□□□ 1.55
LYSMD4-208ENST00000493256 SKIP12755 728 aa24.76■■□□□ 1.55
LYSMD4-208ENST00000493256 PLA2G5P39877 138 aa24.76■■□□□ 1.55
LYSMD4-208ENST00000493256 BCAR1P56945 870 aa24.76■■□□□ 1.55
LYSMD4-208ENST00000493256 KCNC3Q14003 757 aa24.76■■□□□ 1.55
LYSMD4-208ENST00000493256 TMC7Q7Z402 723 aa24.76■■□□□ 1.55
LYSMD4-208ENST00000493256 AGPAT5Q9NUQ2 364 aa24.76■■□□□ 1.55
LYSMD4-208ENST00000493256 NT5C1B-RDH14C9J2C7 533 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 WNT7AO00755 349 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 SRGAP2CP0DJJ0 459 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 RAB27AP51159 221 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 LAMTOR4Q0VGL1 99 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 ST3GAL1Q11201 340 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 EMC2Q15006 297 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 XKR9Q5GH70 373 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 TMEM184AQ6ZMB5 413 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 OTUD6AQ7L8S5 288 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 RNF135Q8IUD6 432 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 TPH2Q8IWU9 490 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 DIS3L2Q8IYB7 885 aaKnown RBP24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 RSPH1Q8WYR4 309 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 MINDY3Q9H8M7 445 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 MUTYHQ9UIF7 546 aa24.75■■□□□ 1.55
LYSMD4-208ENST00000493256 GAS2O43903 313 aaKnown RBP24.74■■□□□ 1.55
LYSMD4-208ENST00000493256 ZNF623O75123 536 aa24.74■■□□□ 1.55
LYSMD4-208ENST00000493256 SLITRK3O94933 977 aa24.74■■□□□ 1.55
LYSMD4-208ENST00000493256 ALDH7A1P49419 539 aaKnown RBP24.74■■□□□ 1.55
LYSMD4-208ENST00000493256 CALCRLQ16602 461 aa24.74■■□□□ 1.55
LYSMD4-208ENST00000493256 GLB1LQ6UWU2 654 aa24.74■■□□□ 1.55
LYSMD4-208ENST00000493256 SRGAP1Q7Z6B7 1085 aa24.74■■□□□ 1.55
LYSMD4-208ENST00000493256 EIF2AK1Q9BQI3 630 aaKnown RBP24.74■■□□□ 1.55
LYSMD4-208ENST00000493256 LOC730098B7Z3J9 87 aa24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 EIF5BO60841 1220 aaKnown RBP24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 ZC3H11AO75152 810 aaKnown RBP eCLIP24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 HERC4Q5GLZ8 1057 aaPredicted RBP24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 NOMO2Q5JPE7 1267 aa24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 LLGL2Q6P1M3 1020 aa24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 FERMT3Q86UX7 667 aa24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 TCP11Q8WWU5 503 aa24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 SUSD6Q92537 303 aa24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 FAM122AQ96E09 287 aa24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 TBC1D13Q9NVG8 400 aa24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 PCDHA12Q9UN75 941 aa24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 INPP5FQ9Y2H2 1132 aa24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 ARIH1Q9Y4X5 557 aaPredicted RBP24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 PCDHB2Q9Y5E7 798 aa24.73■■□□□ 1.55
LYSMD4-208ENST00000493256 C2orf71A6NGG8 1288 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 NEMFO60524 1076 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 OFD1O75665 1012 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 SRGAP2BP0DMP2 458 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 TECP42680 631 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 TRIM29Q14134 588 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 SMC1AQ14683 1233 aaKnown RBP24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 ANKRD54Q6NXT1 300 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 TMEM173Q86WV6 379 aaPredicted RBP24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 MRPL43Q8N983 215 aaKnown RBP24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 RNF149Q8NC42 400 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 TMEM169Q96HH4 297 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 MTRQ99707 1265 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 HSD17B14Q9BPX1 270 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 PHF7Q9BWX1 381 aaPredicted RBP24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 S1PR5Q9H228 398 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 NRDE2Q9H7Z3 1164 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 TTC12Q9H892 705 aaPredicted RBP24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 XPNPEP1Q9NQW7 623 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 MUC6Q6W4X9 2439 aa24.72■■□□□ 1.55
LYSMD4-208ENST00000493256 ASAP2O43150 1006 aa24.71■■□□□ 1.55
LYSMD4-208ENST00000493256 LYPLA2O95372 231 aa24.71■■□□□ 1.55
LYSMD4-208ENST00000493256 HOXA11P31270 313 aaPredicted RBP24.71■■□□□ 1.55
LYSMD4-208ENST00000493256 SYCE2Q6PIF2 218 aa24.71■■□□□ 1.55
LYSMD4-208ENST00000493256 PGBD4Q96DM1 585 aa24.71■■□□□ 1.55
LYSMD4-208ENST00000493256 RNASELQ05823 741 aaKnown RBP24.7■■□□□ 1.54
LYSMD4-208ENST00000493256 CBX2Q14781 532 aaPredicted RBP24.7■■□□□ 1.54
LYSMD4-208ENST00000493256 UBXN11Q5T124 520 aa24.7■■□□□ 1.54
LYSMD4-208ENST00000493256 AGMOQ6ZNB7 445 aa24.7■■□□□ 1.54
LYSMD4-208ENST00000493256 MRPL10Q7Z7H8 261 aaKnown RBP24.7■■□□□ 1.54
LYSMD4-208ENST00000493256 BCL7CQ8WUZ0 217 aaPredicted RBP24.7■■□□□ 1.54
LYSMD4-208ENST00000493256 MTMR9Q96QG7 549 aa24.7■■□□□ 1.54
LYSMD4-208ENST00000493256 TECTAO75443 2155 aa24.69■■□□□ 1.54
LYSMD4-208ENST00000493256 B4GALT3O60512 393 aa24.69■■□□□ 1.54
LYSMD4-208ENST00000493256 GALTP07902 379 aa24.69■■□□□ 1.54
LYSMD4-208ENST00000493256 TXKP42681 527 aa24.69■■□□□ 1.54
LYSMD4-208ENST00000493256 VPS52Q8N1B4 723 aa24.69■■□□□ 1.54
LYSMD4-208ENST00000493256 IGSF21Q96ID5 467 aa24.69■■□□□ 1.54
LYSMD4-208ENST00000493256 RPGRIP1Q96KN7 1286 aa24.69■■□□□ 1.54
LYSMD4-208ENST00000493256 APOL5Q9BWW9 433 aa24.69■■□□□ 1.54
LYSMD4-208ENST00000493256 GBP3Q9H0R5 595 aa24.69■■□□□ 1.54
LYSMD4-208ENST00000493256 ZBP1Q9H171 429 aa24.69■■□□□ 1.54
LYSMD4-208ENST00000493256 ANKEF1Q9NU02 776 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms