RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 ADAMTS3O15072 1205 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 PRPF3O43395 683 aaKnown RBP12.38□□□□□ -0.43
SND1-215ENST00000492772 ZNF623O75123 536 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 CSDE1O75534 798 aaKnown RBP12.38□□□□□ -0.43
SND1-215ENST00000492772 GALTP07902 379 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 ADD1P35611 737 aaKnown RBP12.38□□□□□ -0.43
SND1-215ENST00000492772 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
SND1-215ENST00000492772 MTERF2Q49AM1 385 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 XKR3Q5GH77 459 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 KANK3Q6NY19 840 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 ELMSAN1Q6PJG2 1045 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 C15orf39Q6ZRI6 1047 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 ADSSL1Q8N142 457 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 URGCPQ8TCY9 931 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 BCL7CQ8WUZ0 217 aaPredicted RBP12.38□□□□□ -0.43
SND1-215ENST00000492772 LPPQ93052 612 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 PGBD4Q96DM1 585 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 NIFKQ9BYG3 293 aaKnown RBP12.38□□□□□ -0.43
SND1-215ENST00000492772 UNC45AQ9H3U1 944 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 FAM105AQ9NUU6 356 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 IGSF9Q9P2J2 1179 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 FBXL21Q9UKT6 434 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 INPP5FQ9Y2H2 1132 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 CACNA1AO00555 2505 aa12.38□□□□□ -0.43
SND1-215ENST00000492772 A0A087WZ62 844 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 IGKV6-21A0A0C4DH24 114 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 NPR3P17342 541 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 KLRC2P26717 231 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 ID4P47928 161 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 SLC11A1P49279 550 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 USP11P51784 963 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 CLCN4P51793 760 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 DRP2Q13474 957 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 ANGPT1Q15389 498 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 LETM2Q2VYF4 491 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 ADCK5Q3MIX3 580 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 CATSPER4Q7RTX7 472 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 MIER3Q7Z3K6 550 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 CMASQ8NFW8 434 aaPredicted RBP12.37□□□□□ -0.43
SND1-215ENST00000492772 JPH2Q9BR39 696 aaPredicted RBP12.37□□□□□ -0.43
SND1-215ENST00000492772 FDXACB1Q9BRP7 624 aaPredicted RBP12.37□□□□□ -0.43
SND1-215ENST00000492772 VN1R3Q9BXE9 311 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 GBP3Q9H0R5 595 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 KCNK12Q9HB15 430 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 DNAJB4Q9UDY4 337 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 CNTNAP2Q9UHC6 1331 aa12.37□□□□□ -0.43
SND1-215ENST00000492772 WDR87Q6ZQQ6 2873 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 MAFO75444 373 aaPredicted RBP12.36□□□□□ -0.43
SND1-215ENST00000492772 OFD1O75665 1012 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 NONOQ15233 471 aaKnown RBP eCLIP12.36□□□□□ -0.43
SND1-215ENST00000492772 LONRF3Q496Y0 759 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 RHPN2Q8IUC4 686 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 RASEFQ8IZ41 740 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 SIX5Q8N196 739 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 DTWD2Q8NBA8 298 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 STAMQ92783 540 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 KLHL5Q96PQ7 755 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 TMEM175Q9BSA9 504 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 RNF26Q9BY78 433 aaPredicted RBP12.36□□□□□ -0.43
SND1-215ENST00000492772 RHOBTB2Q9BYZ6 727 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 C22orf23Q9BZE7 217 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 MRPL17Q9NRX2 175 aaKnown RBP12.36□□□□□ -0.43
SND1-215ENST00000492772 AGPAT5Q9NUQ2 364 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 KANSL3Q9P2N6 904 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 SUCLA2Q9P2R7 463 aaPredicted RBP12.36□□□□□ -0.43
SND1-215ENST00000492772 DPP7Q9UHL4 492 aa12.36□□□□□ -0.43
SND1-215ENST00000492772 DCHS1Q96JQ0 3298 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 MEIS3P2A8K0S8 358 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 PSMD10O75832 226 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 SSBP05455 408 aaKnown RBP eCLIP12.35□□□□□ -0.43
SND1-215ENST00000492772 URODP06132 367 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 ADH1AP07327 375 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 CNPP09543 421 aaKnown RBP12.35□□□□□ -0.43
SND1-215ENST00000492772 RFX1P22670 979 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 Q4G0T1 1027 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 BMP2KLQ5H9B9 411 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 CYP26C1Q6V0L0 522 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 BRF1Q92994 677 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 PHKBQ93100 1093 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 NLRP4Q96MN2 994 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 FAM193BQ96PV7 902 aaPredicted RBP12.35□□□□□ -0.43
SND1-215ENST00000492772 SEMA4AQ9H3S1 761 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 RSAD1Q9HA92 442 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 MAN1C1Q9NR34 630 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 SH3GLB2Q9NR46 395 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 WNT16Q9UBV4 365 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 SSX2IPQ9Y2D8 614 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 PCDHB2Q9Y5E7 798 aa12.35□□□□□ -0.43
SND1-215ENST00000492772 TMEM150BA6NC51 233 aa12.34□□□□□ -0.43
SND1-215ENST00000492772 PI15O43692 258 aa12.34□□□□□ -0.43
SND1-215ENST00000492772 B4GALT3O60512 393 aa12.34□□□□□ -0.43
SND1-215ENST00000492772 STBD1O95210 358 aa12.34□□□□□ -0.43
SND1-215ENST00000492772 SOD2P04179 222 aa12.34□□□□□ -0.43
SND1-215ENST00000492772 B3GNT9Q6UX72 402 aa12.34□□□□□ -0.43
SND1-215ENST00000492772 AGMOQ6ZNB7 445 aa12.34□□□□□ -0.43
SND1-215ENST00000492772 Q6ZUG5 572 aa12.34□□□□□ -0.43
SND1-215ENST00000492772 MRPL10Q7Z7H8 261 aaKnown RBP12.34□□□□□ -0.43
SND1-215ENST00000492772 ZNF280BQ86YH2 543 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms