RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 PHOSPHO1Q8TCT1 267 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 TIFAQ96CG3 184 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 HRASLS5Q96KN8 279 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 TEKT5Q96M29 485 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 MYD88Q99836 296 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 DBNDD2Q9BQY9 259 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 SRPK3Q9UPE1 567 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 LTN1O94822 1766 aa3.72□□□□□ -1.81
SNX13-209ENST00000492626 RNF225M0QZC1 329 aaPredicted RBP3.71□□□□□ -1.81
SNX13-209ENST00000492626 IFRD1O00458 451 aaPredicted RBP3.71□□□□□ -1.81
SNX13-209ENST00000492626 FOXP2O15409 715 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 MGEA5O60502 916 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 RAC2P15153 192 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 FPR2P25090 351 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 GATA4P43694 442 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 MECP2P51608 486 aaKnown RBP3.71□□□□□ -1.81
SNX13-209ENST00000492626 NEK3P51956 506 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 ERVK-21P61565 698 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 RAPGEF1Q13905 1077 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 ANO4Q32M45 955 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 TOR2AQ5JU69 321 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 GALNT18Q6P9A2 607 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 CCDC62Q6P9F0 684 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 CEP128Q6ZU80 1094 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 SPPL2CQ8IUH8 684 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 CMTR2Q8IYT2 770 aaKnown RBP3.71□□□□□ -1.81
SNX13-209ENST00000492626 DZIP1LQ8IYY4 767 aaKnown RBP3.71□□□□□ -1.81
SNX13-209ENST00000492626 CALML6Q8TD86 181 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 RPGRQ92834 1020 aaKnown RBP3.71□□□□□ -1.81
SNX13-209ENST00000492626 FAM193BQ96PV7 902 aaPredicted RBP3.71□□□□□ -1.81
SNX13-209ENST00000492626 ELF4Q99607 663 aaPredicted RBP3.71□□□□□ -1.81
SNX13-209ENST00000492626 SELENOOQ9BVL4 669 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 CD244Q9BZW8 370 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 CCM2LQ9NUG4 571 aaPredicted RBP3.71□□□□□ -1.81
SNX13-209ENST00000492626 ARHGAP28Q9P2N2 729 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 DAAM1Q9Y4D1 1078 aa3.71□□□□□ -1.81
SNX13-209ENST00000492626 TRIM75PA6NK02 468 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 HGSO14964 777 aaPredicted RBP3.71□□□□□ -1.82
SNX13-209ENST00000492626 H2AFYO75367 372 aaKnown RBP3.71□□□□□ -1.82
SNX13-209ENST00000492626 AK2P54819 239 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 SPIDRQ14159 915 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 GRM3Q14832 879 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 CC2D1AQ6P1N0 951 aaPredicted RBP3.71□□□□□ -1.82
SNX13-209ENST00000492626 OTOP3Q7RTS5 596 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 SMAP1Q8IYB5 467 aaPredicted RBP3.71□□□□□ -1.82
SNX13-209ENST00000492626 ARMC10Q8N2F6 343 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 PPM1NQ8N819 430 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 VPS37AQ8NEZ2 397 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 NUP43Q8NFH3 380 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 TUBGCP5Q96RT8 1024 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 QRSL1Q9H0R6 528 aaKnown RBP3.71□□□□□ -1.82
SNX13-209ENST00000492626 PPCSQ9HAB8 311 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 KMT5AQ9NQR1 393 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 ROCK1Q13464 1354 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 TONSLQ96HA7 1378 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 PRPF3O43395 683 aaKnown RBP3.71□□□□□ -1.82
SNX13-209ENST00000492626 PQBP1O60828 265 aaKnown RBP3.71□□□□□ -1.82
SNX13-209ENST00000492626 CLASP2O75122 1294 aaKnown RBP3.71□□□□□ -1.82
SNX13-209ENST00000492626 SRFP11831 508 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 CHRNEQ04844 493 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 DEFB115Q30KQ5 88 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 TTC38Q5R3I4 469 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 CPZQ66K79 652 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 BICRALQ6AI39 1079 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 DARS2Q6PI48 645 aaKnown RBP3.71□□□□□ -1.82
SNX13-209ENST00000492626 PHYKPLQ8IUZ5 450 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 FAM186BQ8IYM0 893 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 OXR1Q8N573 874 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 MAML3Q96JK9 1138 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 WNT8AQ9H1J5 351 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 PRO3102Q9H379 93 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 SLC6A20Q9NP91 592 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 PCDHB4Q9Y5E5 795 aa3.71□□□□□ -1.82
SNX13-209ENST00000492626 UBA6A0AVT1 1052 aaPredicted RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 CACNB3P54284 484 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 CORO7P57737 925 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 ROM1Q03395 351 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 MORC3Q14149 939 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 GBX1Q14549 363 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 EPHA7Q15375 998 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 FSCN1Q16658 493 aaKnown RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.7□□□□□ -1.82
SNX13-209ENST00000492626 PRAMEF9Q5VWM5 478 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 PPP4R3AQ6IN85 833 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 ZPBP2Q6X784 338 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 ANO3Q9BYT9 981 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 CNNM1Q9NRU3 951 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 OSMP13725 252 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 TACR1P25103 407 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 FNTBP49356 437 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 ADKP55263 362 aaKnown RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 CYP4F3Q08477 520 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 KIAA0753Q2KHM9 967 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 PLA2G4EQ3MJ16 856 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 APBB1IPQ7Z5R6 666 aaPredicted RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 AUTS2Q8WXX7 1259 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 MTFMTQ96DP5 389 aaKnown RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 SMOC1Q9H4F8 434 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 ARFGAP3Q9NP61 516 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 ERVK13-1Q9NX77 482 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms