RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 PSAPP07602 524 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 SKIP12755 728 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 RXRAP19793 462 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 CHMLP26374 656 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 SLC19A1P41440 591 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 METAP2P50579 478 aaKnown RBP eCLIP11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 BCAR1P56945 870 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 ANTXR2P58335 489 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 ITGB3BPQ13352 177 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 TDGQ13569 410 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 DSC3Q14574 896 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 EFCAB12Q6NXP0 572 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 CCDC149Q6ZUS6 474 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 PLA2G4DQ86XP0 818 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 CCDC60Q8IWA6 550 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 SCUBE3Q8IX30 993 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 SMAP1Q8IYB5 467 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 SLC39A11Q8N1S5 342 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 ZNF713Q8N859 430 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 MAP4K1Q92918 833 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 ZNF577Q9BSK1 485 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 EMILIN2Q9BXX0 1053 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 ANO3Q9BYT9 981 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 IL25Q9H293 177 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 RBM28Q9NW13 759 aaKnown RBP11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 DAXXQ9UER7 740 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 BAZ2BQ9UIF8 2168 aaKnown RBP11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 SMCO2A6NFE2 343 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 SH2B2O14492 632 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 GPR32O75388 356 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 NR1I2O75469 434 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 C22orf31O95567 290 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 WEE2P0C1S8 567 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 AOC1P19801 751 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 SREBF1P36956 1147 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 POLGP54098 1239 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 RNASELQ05823 741 aaKnown RBP11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 ANGPT1Q15389 498 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 TTC22Q5TAA0 569 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 ZNF746Q6NUN9 644 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 TMC5Q6UXY8 1006 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 TMTC3Q6ZXV5 915 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 MICU3Q86XE3 530 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 C12orf76Q8N812 135 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 HELQQ8TDG4 1101 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 HINFPQ9BQA5 517 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 SFXN1Q9H9B4 322 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 DPP7Q9UHL4 492 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 PCDHA10Q9Y5I2 948 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 MAFBQ9Y5Q3 323 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 RBM8AQ9Y5S9 174 aaKnown RBP11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 LAMA4Q16363 1823 aa11.02□□□□□ -0.65
TNFRSF9-203ENST00000492571 NT5C1B-RDH14C9J2C7 533 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 SGSM2O43147 1006 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 ZC3H11AO75152 810 aaKnown RBP eCLIP11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 CCNE2O96020 404 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 LMNAP02545 664 aaKnown RBP11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 KLRC2P26717 231 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 DNM2P50570 870 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 CLCN3P51790 818 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 SETQ01105 290 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 ZC3H14Q6PJT7 736 aaKnown RBP11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 GLB1LQ6UWU2 654 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 LIAT1Q6ZQX7 453 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 CCDC105Q8IYK2 499 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 DTWD2Q8NBA8 298 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 PGBD1Q96JS3 809 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 INO80BQ9C086 356 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 CHST12Q9NRB3 414 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 IGSF9Q9P2J2 1179 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 GABBR1Q9UBS5 961 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 CDH22Q9UJ99 828 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 IRAK3Q9Y616 596 aa11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 RIF1Q5UIP0 2472 aaKnown RBP11.01□□□□□ -0.65
TNFRSF9-203ENST00000492571 CTSAP10619 480 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 EPCAMP16422 314 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 TBC1D8BQ0IIM8 1120 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 CLLU1OSQ5K130 101 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 PLA2G2CQ5R387 149 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 WWC2Q6AWC2 1192 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 DGLUCYQ7Z3D6 616 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 GPR149Q86SP6 731 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 DDX53Q86TM3 631 aaKnown RBP11□□□□□ -0.65
TNFRSF9-203ENST00000492571 RAB11FIP4Q86YS3 637 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 SIX5Q8N196 739 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 STAMQ92783 540 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 GCOM2Q9BZD3 368 aaPredicted RBP11□□□□□ -0.65
TNFRSF9-203ENST00000492571 SMOC2Q9H3U7 446 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 KCNK12Q9HB15 430 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 DUSP12Q9UNI6 340 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 TAF6LQ9Y6J9 622 aa11□□□□□ -0.65
TNFRSF9-203ENST00000492571 WDR64B1ANS9 1081 aa10.99□□□□□ -0.65
TNFRSF9-203ENST00000492571 ZBTB42B2RXF5 422 aa10.99□□□□□ -0.65
TNFRSF9-203ENST00000492571 DARSP14868 501 aaKnown RBP10.99□□□□□ -0.65
TNFRSF9-203ENST00000492571 GSPT1P15170 499 aaKnown RBP10.99□□□□□ -0.65
TNFRSF9-203ENST00000492571 ATP4AP20648 1035 aa10.99□□□□□ -0.65
TNFRSF9-203ENST00000492571 SFPQP23246 707 aaKnown RBP eCLIP10.99□□□□□ -0.65
TNFRSF9-203ENST00000492571 RTN1Q16799 776 aa10.99□□□□□ -0.65
TNFRSF9-203ENST00000492571 LETM2Q2VYF4 491 aa10.99□□□□□ -0.65
TNFRSF9-203ENST00000492571 RNF20Q5VTR2 975 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms