RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 SP7Q8TDD2 431 aaPredicted RBP15.3■□□□□ 0.04
PTPN7-215ENST00000492451 IFT74Q96LB3 600 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 DRC1Q96MC2 740 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 PLIN2Q99541 437 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 C2orf40Q9H1Z8 148 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 ELAC1Q9H777 363 aaKnown RBP15.3■□□□□ 0.04
PTPN7-215ENST00000492451 GPRC5CQ9NQ84 441 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 TMEM161AQ9NX61 479 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 ATP6V1DQ9Y5K8 247 aa15.3■□□□□ 0.04
PTPN7-215ENST00000492451 SPTBN5Q9NRC6 3674 aaKnown RBP15.29■□□□□ 0.04
PTPN7-215ENST00000492451 TRANK1O15050 2925 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 LRRIQ4A6NIV6 560 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 INO80B-WBP1J3KQ70 363 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 LPXNO60711 386 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 DGKIO75912 1065 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 SSBP05455 408 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTPN7-215ENST00000492451 PLA2G4BP0C869 781 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 GUCY2CP25092 1073 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 AXLP30530 894 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 NAMPTP43490 491 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 KARSQ15046 597 aaKnown RBP15.29■□□□□ 0.04
PTPN7-215ENST00000492451 RINT1Q6NUQ1 792 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 C1orf186Q6ZWK4 172 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 ZBTB8OSQ8IWT0 167 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 KCNG4Q8TDN1 519 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 ARNTL2Q8WYA1 636 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 TRAIPQ9BWF2 469 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 MINDY3Q9H8M7 445 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 AGPAT5Q9NUQ2 364 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 DAXXQ9UER7 740 aaPredicted RBP15.29■□□□□ 0.04
PTPN7-215ENST00000492451 KCNG1Q9UIX4 513 aa15.29■□□□□ 0.04
PTPN7-215ENST00000492451 PIN4Q9Y237 131 aaKnown RBP15.29■□□□□ 0.04
PTPN7-215ENST00000492451 MYO9BQ13459 2157 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 ADGRA3Q8IWK6 1321 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 A0A0U1RQF3 1178 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 LINC01553A4QN01 128 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 HOXA2O43364 376 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 EOMESO95936 686 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 PLCG1P19174 1290 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 SLC12A3P55017 1021 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 FOXD4L6Q3SYB3 417 aaPredicted RBP15.28■□□□□ 0.04
PTPN7-215ENST00000492451 TWF2Q6IBS0 349 aaKnown RBP15.28■□□□□ 0.04
PTPN7-215ENST00000492451 FOXD4L3Q6VB84 417 aaPredicted RBP15.28■□□□□ 0.04
PTPN7-215ENST00000492451 ECHDC2Q86YB7 292 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 CMTR2Q8IYT2 770 aaKnown RBP15.28■□□□□ 0.04
PTPN7-215ENST00000492451 FIBCD1Q8N539 461 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 DEPTORQ8TB45 409 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 SYMPKQ92797 1274 aaKnown RBP15.28■□□□□ 0.04
PTPN7-215ENST00000492451 ZNF689Q96CS4 500 aaPredicted RBP15.28■□□□□ 0.04
PTPN7-215ENST00000492451 EPSTI1Q96J88 318 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 SAMD11Q96NU1 681 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 CLIC6Q96NY7 704 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 TGS1Q96RS0 853 aaKnown RBP15.28■□□□□ 0.04
PTPN7-215ENST00000492451 C17orf75Q9HAS0 396 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 STK17AQ9UEE5 414 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 MTCH2Q9Y6C9 303 aa15.28■□□□□ 0.04
PTPN7-215ENST00000492451 CUTAO60888 179 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 HIP1RO75146 1068 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 IBSPP21815 317 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-215ENST00000492451 RAB27AP51159 221 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 EFNA5P52803 228 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 ERVK-21P61565 698 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 MBTD1Q05BQ5 628 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 BTG3Q14201 252 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-215ENST00000492451 SPECC1Q5M775 1068 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 RRAGBQ5VZM2 374 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 CDCA2Q69YH5 1023 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-215ENST00000492451 CCDC73Q6ZRK6 1079 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 MICALL1Q8N3F8 863 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 RSPH1Q8WYR4 309 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 CCDC51Q96ER9 411 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 PRIMPOLQ96LW4 560 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 RUSC1Q9BVN2 902 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 RC3H2Q9HBD1 1191 aaKnown RBP15.27■□□□□ 0.04
PTPN7-215ENST00000492451 PRMT7Q9NVM4 692 aaPredicted RBP15.27■□□□□ 0.04
PTPN7-215ENST00000492451 RWDD3Q9Y3V2 267 aa15.27■□□□□ 0.04
PTPN7-215ENST00000492451 PHLPP2Q6ZVD8 1323 aa15.26■□□□□ 0.03
PTPN7-215ENST00000492451 TSPAN1O60635 241 aa15.26■□□□□ 0.03
PTPN7-215ENST00000492451 DDIT3P35638 169 aa15.26■□□□□ 0.03
PTPN7-215ENST00000492451 NUCB2P80303 420 aa15.26■□□□□ 0.03
PTPN7-215ENST00000492451 DNM1Q05193 864 aaKnown RBP15.26■□□□□ 0.03
PTPN7-215ENST00000492451 DMP1Q13316 513 aaPredicted RBP15.26■□□□□ 0.03
PTPN7-215ENST00000492451 NOTUMQ6P988 496 aa15.26■□□□□ 0.03
PTPN7-215ENST00000492451 PPP4R3CPQ6ZMV5 832 aa15.26■□□□□ 0.03
PTPN7-215ENST00000492451 USP49Q70CQ1 688 aa15.26■□□□□ 0.03
PTPN7-215ENST00000492451 LARP4BQ92615 738 aaKnown RBP15.26■□□□□ 0.03
PTPN7-215ENST00000492451 RAD54LQ92698 747 aa15.26■□□□□ 0.03
PTPN7-215ENST00000492451 BLOC1S4Q9NUP1 217 aa15.26■□□□□ 0.03
PTPN7-215ENST00000492451 MTUS1Q9ULD2 1270 aa15.26■□□□□ 0.03
PTPN7-215ENST00000492451 ZDHHC9Q9Y397 364 aa15.26■□□□□ 0.03
PTPN7-215ENST00000492451 RBM19Q9Y4C8 960 aaKnown RBP15.26■□□□□ 0.03
PTPN7-215ENST00000492451 ZNF623O75123 536 aa15.25■□□□□ 0.03
PTPN7-215ENST00000492451 POU3F3P20264 500 aaPredicted RBP15.25■□□□□ 0.03
PTPN7-215ENST00000492451 HOXA11P31270 313 aaPredicted RBP15.25■□□□□ 0.03
PTPN7-215ENST00000492451 ME1P48163 572 aa15.25■□□□□ 0.03
PTPN7-215ENST00000492451 KRT85P78386 507 aa15.25■□□□□ 0.03
PTPN7-215ENST00000492451 MAPK6Q16659 721 aa15.25■□□□□ 0.03
PTPN7-215ENST00000492451 AMHR2Q16671 573 aa15.25■□□□□ 0.03
PTPN7-215ENST00000492451 FAM187BQ17R55 369 aa15.25■□□□□ 0.03
PTPN7-215ENST00000492451 GPBP1Q86WP2 473 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms