RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 INO80BQ9C086 356 aaPredicted RBP16.28■□□□□ 0.2
SSR4-212ENST00000491833 FAM105AQ9NUU6 356 aa16.28■□□□□ 0.2
SSR4-212ENST00000491833 SPTBN4Q9H254 2564 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 A0A087WZ62 844 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 CCDC196A0A1B0GTZ2 297 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 ADAMTS3O15072 1205 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 PI15O43692 258 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 KLRC2P26717 231 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 SLC11A1P49279 550 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 DNM2P50570 870 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 CLCN4P51793 760 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 DRP2Q13474 957 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 TARBP2Q15633 366 aaKnown RBP16.27■□□□□ 0.2
SSR4-212ENST00000491833 C15orf39Q6ZRI6 1047 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 ZNF410Q86VK4 478 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 DTWD2Q8NBA8 298 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 CCDC148Q8NFR7 591 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 FEZF2Q8TBJ5 459 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 URGCPQ8TCY9 931 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 BICD2Q8TD16 824 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 RIT2Q99578 217 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 FDXACB1Q9BRP7 624 aaPredicted RBP16.27■□□□□ 0.2
SSR4-212ENST00000491833 KCNK12Q9HB15 430 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 IGSF9Q9P2J2 1179 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 DNAJB4Q9UDY4 337 aa16.27■□□□□ 0.2
SSR4-212ENST00000491833 MSH4O15457 936 aa16.26■□□□□ 0.19
SSR4-212ENST00000491833 RFX1P22670 979 aa16.26■□□□□ 0.19
SSR4-212ENST00000491833 ADD1P35611 737 aaKnown RBP16.26■□□□□ 0.19
SSR4-212ENST00000491833 FGD1P98174 961 aa16.26■□□□□ 0.19
SSR4-212ENST00000491833 LETM2Q2VYF4 491 aa16.26■□□□□ 0.19
SSR4-212ENST00000491833 LRCH2Q5VUJ6 765 aa16.26■□□□□ 0.19
SSR4-212ENST00000491833 CATSPER4Q7RTX7 472 aa16.26■□□□□ 0.19
SSR4-212ENST00000491833 RDM1Q8NG50 284 aa16.26■□□□□ 0.19
SSR4-212ENST00000491833 PGBD4Q96DM1 585 aa16.26■□□□□ 0.19
SSR4-212ENST00000491833 KLHL5Q96PQ7 755 aa16.26■□□□□ 0.19
SSR4-212ENST00000491833 VN1R3Q9BXE9 311 aa16.26■□□□□ 0.19
SSR4-212ENST00000491833 UNC45AQ9H3U1 944 aa16.26■□□□□ 0.19
SSR4-212ENST00000491833 RIF1Q5UIP0 2472 aaKnown RBP16.26■□□□□ 0.19
SSR4-212ENST00000491833 IGKV6-21A0A0C4DH24 114 aa16.25■□□□□ 0.19
SSR4-212ENST00000491833 MEIS3P2A8K0S8 358 aa16.25■□□□□ 0.19
SSR4-212ENST00000491833 OFD1O75665 1012 aa16.25■□□□□ 0.19
SSR4-212ENST00000491833 SSBP05455 408 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSR4-212ENST00000491833 CNPP09543 421 aaKnown RBP16.25■□□□□ 0.19
SSR4-212ENST00000491833 KRT32Q14532 448 aa16.25■□□□□ 0.19
SSR4-212ENST00000491833 ADCK5Q3MIX3 580 aa16.25■□□□□ 0.19
SSR4-212ENST00000491833 XKR3Q5GH77 459 aa16.25■□□□□ 0.19
SSR4-212ENST00000491833 MIER3Q7Z3K6 550 aa16.25■□□□□ 0.19
SSR4-212ENST00000491833 RHPN2Q8IUC4 686 aa16.25■□□□□ 0.19
SSR4-212ENST00000491833 SLC5A5Q92911 643 aa16.25■□□□□ 0.19
SSR4-212ENST00000491833 MRPL17Q9NRX2 175 aaKnown RBP16.25■□□□□ 0.19
SSR4-212ENST00000491833 NID2Q14112 1375 aa16.25■□□□□ 0.19
SSR4-212ENST00000491833 DCHS1Q96JQ0 3298 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 NARSO43776 548 aaKnown RBP16.24■□□□□ 0.19
SSR4-212ENST00000491833 B4GALT3O60512 393 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 ZNF623O75123 536 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 URODP06132 367 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 GBP2P32456 591 aaPredicted RBP16.24■□□□□ 0.19
SSR4-212ENST00000491833 AKAP17AQ02040 695 aaKnown RBP16.24■□□□□ 0.19
SSR4-212ENST00000491833 NONOQ15233 471 aaKnown RBP eCLIP16.24■□□□□ 0.19
SSR4-212ENST00000491833 ELMSAN1Q6PJG2 1045 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 ZNF280BQ86YH2 543 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 CMASQ8NFW8 434 aaPredicted RBP16.24■□□□□ 0.19
SSR4-212ENST00000491833 KCNG4Q8TDN1 519 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 STAMQ92783 540 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 NLRP4Q96MN2 994 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 FAM193BQ96PV7 902 aaPredicted RBP16.24■□□□□ 0.19
SSR4-212ENST00000491833 TMEM175Q9BSA9 504 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 NIFKQ9BYG3 293 aaKnown RBP16.24■□□□□ 0.19
SSR4-212ENST00000491833 RSAD1Q9HA92 442 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 MAN1C1Q9NR34 630 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 SUCLA2Q9P2R7 463 aaPredicted RBP16.24■□□□□ 0.19
SSR4-212ENST00000491833 VPS13AQ96RL7 3174 aa16.24■□□□□ 0.19
SSR4-212ENST00000491833 CNTNAP2Q9UHC6 1331 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 TMEM150BA6NC51 233 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 STK25O00506 426 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 PRPF3O43395 683 aaKnown RBP16.23■□□□□ 0.19
SSR4-212ENST00000491833 LMNAP02545 664 aaKnown RBP16.23■□□□□ 0.19
SSR4-212ENST00000491833 CFHP08603 1231 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 HMGB1P09429 215 aaKnown RBP16.23■□□□□ 0.19
SSR4-212ENST00000491833 TSGA10IPQ3SY00 556 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 CEP89Q96ST8 783 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 JPH2Q9BR39 696 aaPredicted RBP16.23■□□□□ 0.19
SSR4-212ENST00000491833 SH2D3AQ9BRG2 576 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 HERC2P3Q9BVR0 1158 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 SEMA4AQ9H3S1 761 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 AGPAT5Q9NUQ2 364 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 WNT16Q9UBV4 365 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 DPP7Q9UHL4 492 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 FAN1Q9Y2M0 1017 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 GVINP1Q7Z2Y8 2422 aa16.23■□□□□ 0.19
SSR4-212ENST00000491833 CLUHO75153 1309 aa16.22■□□□□ 0.19
SSR4-212ENST00000491833 N4BP1O75113 896 aaKnown RBP16.22■□□□□ 0.19
SSR4-212ENST00000491833 MAFO75444 373 aaPredicted RBP16.22■□□□□ 0.19
SSR4-212ENST00000491833 PSMD10O75832 226 aa16.22■□□□□ 0.19
SSR4-212ENST00000491833 DDHD2O94830 711 aa16.22■□□□□ 0.19
SSR4-212ENST00000491833 SOD2P04179 222 aa16.22■□□□□ 0.19
SSR4-212ENST00000491833 ADH1AP07327 375 aa16.22■□□□□ 0.19
SSR4-212ENST00000491833 USP11P51784 963 aa16.22■□□□□ 0.19
SSR4-212ENST00000491833 CYP26C1Q6V0L0 522 aa16.22■□□□□ 0.19
SSR4-212ENST00000491833 AGMOQ6ZNB7 445 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms