RNA–Protein interactions for RNA: ENST00000491429.1

SCN1A-206, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 542 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-206ENST00000491429 KCNQ2O43526 872 aa6.4□□□□□ -1.38
SCN1A-206ENST00000491429 LPXNO60711 386 aa6.4□□□□□ -1.38
SCN1A-206ENST00000491429 ATXN1P54253 815 aaKnown RBP6.4□□□□□ -1.38
SCN1A-206ENST00000491429 ARHGAP44Q17R89 818 aa6.4□□□□□ -1.38
SCN1A-206ENST00000491429 ACSS2Q9NR19 701 aa6.4□□□□□ -1.38
SCN1A-206ENST00000491429 GLRX3O76003 335 aaKnown RBP6.39□□□□□ -1.39
SCN1A-206ENST00000491429 CFBP00751 764 aa6.39□□□□□ -1.39
SCN1A-206ENST00000491429 ZNF37AP17032 561 aaPredicted RBP6.39□□□□□ -1.39
SCN1A-206ENST00000491429 PTX3P26022 381 aaPredicted RBP6.39□□□□□ -1.39
SCN1A-206ENST00000491429 CLK3P49761 638 aaKnown RBP6.39□□□□□ -1.39
SCN1A-206ENST00000491429 BCAR1P56945 870 aa6.39□□□□□ -1.39
SCN1A-206ENST00000491429 FAM189BP81408 668 aa6.39□□□□□ -1.39
SCN1A-206ENST00000491429 COLEC12Q5KU26 742 aa6.39□□□□□ -1.39
SCN1A-206ENST00000491429 ZKSCAN2Q63HK3 967 aa6.39□□□□□ -1.39
SCN1A-206ENST00000491429 DEPDC7Q96QD5 511 aa6.39□□□□□ -1.39
SCN1A-206ENST00000491429 MRPL4Q9BYD3 311 aaKnown RBP6.39□□□□□ -1.39
SCN1A-206ENST00000491429 PCIF1Q9H4Z3 704 aa6.39□□□□□ -1.39
SCN1A-206ENST00000491429 ADARB2Q9NS39 739 aaKnown RBP6.39□□□□□ -1.39
SCN1A-206ENST00000491429 A0A0A6YYK5 440 aaPredicted RBP6.38□□□□□ -1.39
SCN1A-206ENST00000491429 AHRRA9YTQ3 701 aa6.38□□□□□ -1.39
SCN1A-206ENST00000491429 TRIM24O15164 1050 aa6.38□□□□□ -1.39
SCN1A-206ENST00000491429 MTSS1O43312 755 aa6.38□□□□□ -1.39
SCN1A-206ENST00000491429 PPFIA4O75335 1185 aa6.38□□□□□ -1.39
SCN1A-206ENST00000491429 RECQL4O94761 1208 aa6.38□□□□□ -1.39
SCN1A-206ENST00000491429 LAG3P18627 525 aa6.38□□□□□ -1.39
SCN1A-206ENST00000491429 SYCE2Q6PIF2 218 aa6.38□□□□□ -1.39
SCN1A-206ENST00000491429 Q6YL49 198 aa6.38□□□□□ -1.39
SCN1A-206ENST00000491429 KIAA1958Q8N8K9 716 aa6.38□□□□□ -1.39
SCN1A-206ENST00000491429 RPGRQ92834 1020 aaKnown RBP6.38□□□□□ -1.39
SCN1A-206ENST00000491429 FAM193BQ96PV7 902 aaPredicted RBP6.38□□□□□ -1.39
SCN1A-206ENST00000491429 CPPED1Q9BRF8 314 aaPredicted RBP6.38□□□□□ -1.39
SCN1A-206ENST00000491429 SOX7Q9BT81 388 aa6.38□□□□□ -1.39
SCN1A-206ENST00000491429 CPEB1Q9BZB8 566 aaKnown RBP6.38□□□□□ -1.39
SCN1A-206ENST00000491429 ING3Q9NXR8 418 aa6.38□□□□□ -1.39
SCN1A-206ENST00000491429 HOXA3O43365 443 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-206ENST00000491429 GYPEP15421 78 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 SERINC3Q13530 473 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 STRIP1Q5VSL9 837 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 CHST14Q8NCH0 376 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 DNAJC7Q99615 494 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 PITHD1Q9GZP4 211 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-206ENST00000491429 ENKD1Q9H0I2 346 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 KCNH6Q9H252 994 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 MTG2Q9H4K7 406 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 PRDM13Q9H4Q3 707 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 CYP4F11Q9HBI6 524 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 SNTG2Q9NY99 539 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 SAMD15Q9P1V8 674 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 ANKFY1Q9P2R3 1169 aa6.37□□□□□ -1.39
SCN1A-206ENST00000491429 EIF2B4Q9UI10 523 aaKnown RBP6.37□□□□□ -1.39
SCN1A-206ENST00000491429 A0A0A6YYJ9 748 aa6.36□□□□□ -1.39
SCN1A-206ENST00000491429 PTPDC1A2A3K4 754 aa6.36□□□□□ -1.39
SCN1A-206ENST00000491429 CYP17A1P05093 508 aa6.36□□□□□ -1.39
SCN1A-206ENST00000491429 ZEB1P37275 1124 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-206ENST00000491429 EPHA7Q15375 998 aa6.36□□□□□ -1.39
SCN1A-206ENST00000491429 ZCCHC8Q6NZY4 707 aaKnown RBP6.36□□□□□ -1.39
SCN1A-206ENST00000491429 UNQ6494/PRO21346Q6UXR6 183 aa6.36□□□□□ -1.39
SCN1A-206ENST00000491429 KANSL1Q7Z3B3 1105 aa6.36□□□□□ -1.39
SCN1A-206ENST00000491429 LRP10Q7Z4F1 713 aa6.36□□□□□ -1.39
SCN1A-206ENST00000491429 DDX53Q86TM3 631 aaKnown RBP6.36□□□□□ -1.39
SCN1A-206ENST00000491429 MYEOVQ96EZ4 313 aa6.36□□□□□ -1.39
SCN1A-206ENST00000491429 UIMC1Q96RL1 719 aa6.36□□□□□ -1.39
SCN1A-206ENST00000491429 SYNPO2Q9UMS6 1093 aa6.36□□□□□ -1.39
SCN1A-206ENST00000491429 TNPO3Q9Y5L0 923 aaKnown RBP6.36□□□□□ -1.39
SCN1A-206ENST00000491429 APOBEC3AP31941 199 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-206ENST00000491429 ADCY2Q08462 1091 aa6.35□□□□□ -1.39
SCN1A-206ENST00000491429 ESRP1Q6NXG1 681 aaKnown RBP6.35□□□□□ -1.39
SCN1A-206ENST00000491429 GLCCI1Q86VQ1 547 aa6.35□□□□□ -1.39
SCN1A-206ENST00000491429 LILRA3Q8N6C8 439 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-206ENST00000491429 ZSWIM2Q8NEG5 633 aa6.35□□□□□ -1.39
SCN1A-206ENST00000491429 OR52N2Q8NGI0 321 aa6.35□□□□□ -1.39
SCN1A-206ENST00000491429 SLC46A2Q9BY10 475 aa6.35□□□□□ -1.39
SCN1A-206ENST00000491429 OSBPL6Q9BZF3 934 aa6.35□□□□□ -1.39
SCN1A-206ENST00000491429 WDR11Q9BZH6 1224 aa6.35□□□□□ -1.39
SCN1A-206ENST00000491429 R3HDMLQ9H3Y0 253 aa6.35□□□□□ -1.39
SCN1A-206ENST00000491429 SERHL2Q9H4I8 314 aa6.35□□□□□ -1.39
SCN1A-206ENST00000491429 H7C1D1 291 aa6.34□□□□□ -1.39
SCN1A-206ENST00000491429 OPHN1O60890 802 aa6.34□□□□□ -1.39
SCN1A-206ENST00000491429 APOL3O95236 402 aa6.34□□□□□ -1.39
SCN1A-206ENST00000491429 GAAP10253 952 aa6.34□□□□□ -1.39
SCN1A-206ENST00000491429 VPS72Q15906 364 aa6.34□□□□□ -1.39
SCN1A-206ENST00000491429 NME9Q86XW9 330 aa6.34□□□□□ -1.39
SCN1A-206ENST00000491429 JMYQ8N9B5 988 aa6.34□□□□□ -1.39
SCN1A-206ENST00000491429 MYL10Q9BUA6 226 aa6.34□□□□□ -1.39
SCN1A-206ENST00000491429 LSM14BQ9BX40 385 aaKnown RBP6.34□□□□□ -1.39
SCN1A-206ENST00000491429 EPC1Q9H2F5 836 aa6.34□□□□□ -1.39
SCN1A-206ENST00000491429 NCOA5Q9HCD5 579 aaKnown RBP6.34□□□□□ -1.39
SCN1A-206ENST00000491429 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.34□□□□□ -1.39
SCN1A-206ENST00000491429 DNAJC6O75061 913 aa6.33□□□□□ -1.4
SCN1A-206ENST00000491429 PRPF6O94906 941 aaKnown RBP6.33□□□□□ -1.4
SCN1A-206ENST00000491429 FSBPO95073 299 aa6.33□□□□□ -1.4
SCN1A-206ENST00000491429 RAPGEF3O95398 923 aa6.33□□□□□ -1.4
SCN1A-206ENST00000491429 SLC9A1P19634 815 aa6.33□□□□□ -1.4
SCN1A-206ENST00000491429 CD38P28907 300 aa6.33□□□□□ -1.4
SCN1A-206ENST00000491429 CASRP41180 1078 aa6.33□□□□□ -1.4
SCN1A-206ENST00000491429 TAP1Q03518 808 aa6.33□□□□□ -1.4
SCN1A-206ENST00000491429 ZNF174Q15697 407 aa6.33□□□□□ -1.4
SCN1A-206ENST00000491429 RD3Q7Z3Z2 195 aa6.33□□□□□ -1.4
SCN1A-206ENST00000491429 PIK3C3Q8NEB9 887 aa6.33□□□□□ -1.4
SCN1A-206ENST00000491429 ELF4Q99607 663 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms