RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 CASD1Q96PB1 797 aa20.57■□□□□ 0.88
NDUFB4-204ENST00000491335 TMEM117Q9H0C3 514 aa20.57■□□□□ 0.88
NDUFB4-204ENST00000491335 TYW1Q9NV66 732 aaKnown RBP20.57■□□□□ 0.88
NDUFB4-204ENST00000491335 HOXA2O43364 376 aa20.56■□□□□ 0.88
NDUFB4-204ENST00000491335 CLLU1OSQ5K130 101 aa20.56■□□□□ 0.88
NDUFB4-204ENST00000491335 BSNDQ8WZ55 320 aa20.56■□□□□ 0.88
NDUFB4-204ENST00000491335 PNMA5Q96PV4 448 aa20.56■□□□□ 0.88
NDUFB4-204ENST00000491335 PLIN2Q99541 437 aa20.56■□□□□ 0.88
NDUFB4-204ENST00000491335 C11orf84Q9BUA3 381 aaPredicted RBP20.56■□□□□ 0.88
NDUFB4-204ENST00000491335 PLVAPQ9BX97 442 aa20.56■□□□□ 0.88
NDUFB4-204ENST00000491335 FAM105AQ9NUU6 356 aa20.56■□□□□ 0.88
NDUFB4-204ENST00000491335 HCSTQ9UBK5 93 aa20.56■□□□□ 0.88
NDUFB4-204ENST00000491335 CLIC4Q9Y696 253 aa20.56■□□□□ 0.88
NDUFB4-204ENST00000491335 LRRIQ4A6NIV6 560 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 GRM6O15303 877 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 ZNF623O75123 536 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 ERLIN2O94905 339 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 HSP90AA1P07900 732 aaKnown RBP20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 SKIP12755 728 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 GRIN1Q05586 938 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 MBTD1Q05BQ5 628 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 LONRF3Q496Y0 759 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 HYIQ5T013 277 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 SPOUT1Q5T280 376 aaKnown RBP20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 LRRC55Q6ZSA7 311 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 ABI1Q8IZP0 508 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 LPPQ93052 612 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 MRPL38Q96DV4 380 aaKnown RBP20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 NFKBIZQ9BYH8 718 aa20.55■□□□□ 0.88
NDUFB4-204ENST00000491335 TSPAN1O60635 241 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 PTPAQ15257 358 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 PCBP1Q15365 356 aaKnown RBP eCLIP20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 SKIV2LQ15477 1246 aaKnown RBP20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 AMHR2Q16671 573 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 PTPROQ16827 1216 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 UBXN11Q5T124 520 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 HELQQ8TDG4 1101 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 P2RX5Q93086 422 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 CPB2Q96IY4 423 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 AK8Q96MA6 479 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 CWH43Q9H720 699 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 ALG13Q9NP73 1137 aaKnown RBP20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 PLAGL2Q9UPG8 496 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 PCDHB2Q9Y5E7 798 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 REV3LO60673 3130 aa20.54■□□□□ 0.88
NDUFB4-204ENST00000491335 MEIS3P2A8K0S8 358 aa20.53■□□□□ 0.88
NDUFB4-204ENST00000491335 ITGB1P05556 798 aa20.53■□□□□ 0.88
NDUFB4-204ENST00000491335 AXLP30530 894 aa20.53■□□□□ 0.88
NDUFB4-204ENST00000491335 RAB27AP51159 221 aa20.53■□□□□ 0.88
NDUFB4-204ENST00000491335 NAALADL2Q58DX5 795 aa20.53■□□□□ 0.88
NDUFB4-204ENST00000491335 CABP7Q86V35 215 aa20.53■□□□□ 0.88
NDUFB4-204ENST00000491335 KLHL23Q8NBE8 558 aa20.53■□□□□ 0.88
NDUFB4-204ENST00000491335 SPRYD3Q8NCJ5 442 aa20.53■□□□□ 0.88
NDUFB4-204ENST00000491335 NT5C3AQ9H0P0 336 aa20.53■□□□□ 0.88
NDUFB4-204ENST00000491335 ZSCAN16Q9H4T2 348 aaPredicted RBP20.53■□□□□ 0.88
NDUFB4-204ENST00000491335 BRWD1Q9NSI6 2320 aa20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 ARF4P18085 180 aaPredicted RBP20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 MARCKSP29966 332 aaPredicted RBP20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 LONP1P36776 959 aaKnown RBP20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 UBA7P41226 1012 aa20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 CEBPZQ03701 1054 aaKnown RBP20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 NCBP1Q09161 790 aaKnown RBP20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 CDCA2Q69YH5 1023 aaPredicted RBP20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 RINT1Q6NUQ1 792 aa20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 NOTUMQ6P988 496 aa20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 C1orf186Q6ZWK4 172 aa20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 MRPL10Q7Z7H8 261 aaKnown RBP20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 SPPL3Q8TCT6 385 aa20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 KIFAP3Q92845 792 aa20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 CDK5RAP3Q96JB5 506 aa20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 RUSC1Q9BVN2 902 aa20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 AAASQ9NRG9 546 aa20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 PCDHB12Q9Y5F1 795 aa20.52■□□□□ 0.88
NDUFB4-204ENST00000491335 B4GALT5O43286 388 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 SSBP05455 408 aaKnown RBP eCLIP20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 NAMPTP43490 491 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 PPP2R5AQ15172 486 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 TMEM119Q4V9L6 283 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 ZBTB8OSQ8IWT0 167 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 KCTD17Q8N5Z5 321 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 COLGALT1Q8NBJ5 622 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 PGBD4Q96DM1 585 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 IFT74Q96LB3 600 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 USP28Q96RU2 1077 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 EIF2AQ9BY44 585 aaKnown RBP20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 LMAN2LQ9H0V9 348 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 ATG2AQ2TAZ0 1938 aa20.51■□□□□ 0.87
NDUFB4-204ENST00000491335 PLXNA4Q9HCM2 1894 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 SLC26A4O43511 780 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 OFD1O75665 1012 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 DNAJB1P25685 340 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 CAMK1Q14012 370 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 GLB1LQ6UWU2 654 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 AGMOQ6ZNB7 445 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 CDR2LQ86X02 465 aaPredicted RBP20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 DAW1Q8N136 415 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 LRRC43Q8N309 656 aa20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 SYT2Q8N9I0 419 aaPredicted RBP20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 SMG8Q8ND04 991 aaKnown RBP20.5■□□□□ 0.87
NDUFB4-204ENST00000491335 DEPTORQ8TB45 409 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms