RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 CYP4A11Q02928 519 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 EPHA7Q15375 998 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 TMC7Q7Z402 723 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 TMEM173Q86WV6 379 aaPredicted RBP17.58■□□□□ 0.4
SMPD4-220ENST00000491319 C4orf19Q8IY42 314 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 SUSD6Q92537 303 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 WASF1Q92558 559 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 TNFRSF25Q93038 417 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 GTF3C6Q969F1 213 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 TMEM143Q96AN5 459 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 DYDC2Q96IM9 177 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 NAP1L4Q99733 375 aaKnown RBP17.58■□□□□ 0.4
SMPD4-220ENST00000491319 APOL5Q9BWW9 433 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 NGRNQ9NPE2 291 aaKnown RBP17.58■□□□□ 0.4
SMPD4-220ENST00000491319 AGPAT5Q9NUQ2 364 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 PPP4R2Q9NY27 417 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 INPP5FQ9Y2H2 1132 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 DENND4AQ7Z401 1863 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 KMT2EQ8IZD2 1858 aa17.58■□□□□ 0.4
SMPD4-220ENST00000491319 C2orf16Q68DN1 1984 aa17.57■□□□□ 0.4
SMPD4-220ENST00000491319 SRGAP2BP0DMP2 458 aa17.57■□□□□ 0.4
SMPD4-220ENST00000491319 TECP42680 631 aa17.57■□□□□ 0.4
SMPD4-220ENST00000491319 FOSBP53539 338 aa17.57■□□□□ 0.4
SMPD4-220ENST00000491319 CTTNQ14247 550 aaKnown RBP17.57■□□□□ 0.4
SMPD4-220ENST00000491319 EMC2Q15006 297 aa17.57■□□□□ 0.4
SMPD4-220ENST00000491319 ANKRD54Q6NXT1 300 aa17.57■□□□□ 0.4
SMPD4-220ENST00000491319 TMEM184AQ6ZMB5 413 aa17.57■□□□□ 0.4
SMPD4-220ENST00000491319 NSUN7Q8NE18 718 aaKnown RBP17.57■□□□□ 0.4
SMPD4-220ENST00000491319 PSPC1Q8WXF1 523 aaKnown RBP17.57■□□□□ 0.4
SMPD4-220ENST00000491319 PHF7Q9BWX1 381 aaPredicted RBP17.57■□□□□ 0.4
SMPD4-220ENST00000491319 MINDY3Q9H8M7 445 aa17.57■□□□□ 0.4
SMPD4-220ENST00000491319 TBC1D13Q9NVG8 400 aa17.57■□□□□ 0.4
SMPD4-220ENST00000491319 C2orf71A6NGG8 1288 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 ZBTB39O15060 712 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 SRGAP2CP0DJJ0 459 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 RFC5P40937 340 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 ALDH7A1P49419 539 aaKnown RBP17.56■□□□□ 0.4
SMPD4-220ENST00000491319 RAB27AP51159 221 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 SMC1AQ14683 1233 aaKnown RBP17.56■□□□□ 0.4
SMPD4-220ENST00000491319 CBX2Q14781 532 aaPredicted RBP17.56■□□□□ 0.4
SMPD4-220ENST00000491319 SYCE2Q6PIF2 218 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 GLB1LQ6UWU2 654 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 HFE2Q6ZVN8 426 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 SLFN12Q8IYM2 578 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 PRPF31Q8WWY3 499 aaKnown RBP17.56■□□□□ 0.4
SMPD4-220ENST00000491319 TMEM169Q96HH4 297 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 RPGRIP1Q96KN7 1286 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 S1PR5Q9H228 398 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 BRMS1Q9HCU9 246 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 PPME1Q9Y570 386 aa17.56■□□□□ 0.4
SMPD4-220ENST00000491319 PLXNA3P51805 1871 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 WNT7AO00755 349 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 B4GALT3O60512 393 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 JAK2O60674 1132 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 ZNF623O75123 536 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 BAG4O95429 457 aaKnown RBP17.55■□□□□ 0.4
SMPD4-220ENST00000491319 SKIP12755 728 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 CA8P35219 290 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 LAMTOR4Q0VGL1 99 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 XKR9Q5GH70 373 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 NOMO2Q5JPE7 1267 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 BCL7CQ8WUZ0 217 aaPredicted RBP17.55■□□□□ 0.4
SMPD4-220ENST00000491319 GBP3Q9H0R5 595 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 ZSWIM4Q9H7M6 989 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 NRDE2Q9H7Z3 1164 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 CDH22Q9UJ99 828 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 PCDHB2Q9Y5E7 798 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 HCFC2Q9Y5Z7 792 aa17.55■□□□□ 0.4
SMPD4-220ENST00000491319 OFD1O75665 1012 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 ST3GAL1Q11201 340 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 AGMOQ6ZNB7 445 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 OTUD6AQ7L8S5 288 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 SRGAP1Q7Z6B7 1085 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 FERMT3Q86UX7 667 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 TPH2Q8IWU9 490 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 EXOC8Q8IYI6 725 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 VPS52Q8N1B4 723 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 MRPL43Q8N983 215 aaKnown RBP17.54■□□□□ 0.4
SMPD4-220ENST00000491319 RNF149Q8NC42 400 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 AUTS2Q8WXX7 1259 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 RSPH1Q8WYR4 309 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 MTRQ99707 1265 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 ZBP1Q9H171 429 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 XPNPEP1Q9NQW7 623 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 DNAJB4Q9UDY4 337 aa17.54■□□□□ 0.4
SMPD4-220ENST00000491319 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.53■□□□□ 0.4
SMPD4-220ENST00000491319 BTBD18B2RXH4 712 aa17.53■□□□□ 0.4
SMPD4-220ENST00000491319 GAS2O43903 313 aaKnown RBP17.53■□□□□ 0.4
SMPD4-220ENST00000491319 CLASP2O75122 1294 aaKnown RBP17.53■□□□□ 0.4
SMPD4-220ENST00000491319 GALTP07902 379 aa17.53■□□□□ 0.4
SMPD4-220ENST00000491319 SP100P23497 879 aaPredicted RBP17.53■□□□□ 0.4
SMPD4-220ENST00000491319 HOXA11P31270 313 aaPredicted RBP17.53■□□□□ 0.4
SMPD4-220ENST00000491319 NEK4P51957 841 aa17.53■□□□□ 0.4
SMPD4-220ENST00000491319 RNASELQ05823 741 aaKnown RBP17.53■□□□□ 0.4
SMPD4-220ENST00000491319 CALCRLQ16602 461 aa17.53■□□□□ 0.4
SMPD4-220ENST00000491319 UBXN11Q5T124 520 aa17.53■□□□□ 0.4
SMPD4-220ENST00000491319 DIS3L2Q8IYB7 885 aaKnown RBP17.53■□□□□ 0.4
SMPD4-220ENST00000491319 TCP11Q8WWU5 503 aa17.53■□□□□ 0.4
SMPD4-220ENST00000491319 EDAQ92838 391 aa17.53■□□□□ 0.4
SMPD4-220ENST00000491319 CASP10Q92851 521 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms