RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 HDXQ7Z353 690 aa24.93■■□□□ 1.58
USF3-203ENST00000491165 DHTKD1Q96HY7 919 aaPredicted RBP24.93■■□□□ 1.58
USF3-203ENST00000491165 AP5M1Q9H0R1 490 aa24.93■■□□□ 1.58
USF3-203ENST00000491165 UPF3AQ9H1J1 476 aaKnown RBP24.93■■□□□ 1.58
USF3-203ENST00000491165 HAUS4Q9H6D7 363 aa24.93■■□□□ 1.58
USF3-203ENST00000491165 SEPT9Q9UHD8 586 aaPredicted RBP24.93■■□□□ 1.58
USF3-203ENST00000491165 TFRCP02786 760 aaKnown RBP24.92■■□□□ 1.58
USF3-203ENST00000491165 OATP04181 439 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 CYP11B2P19099 503 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 DNM2P50570 870 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 GPS2Q13227 327 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 FAM160B1Q5W0V3 765 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 KAT2BQ92831 832 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 TRIM9Q9C026 710 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 BMP2KQ9NSY1 1161 aaPredicted RBP24.92■■□□□ 1.58
USF3-203ENST00000491165 GUCA1BQ9UMX6 200 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 TUBBP07437 444 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 CACNB1Q02641 598 aaPredicted RBP24.92■■□□□ 1.58
USF3-203ENST00000491165 PLCB4Q15147 1175 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 DYMQ7RTS9 669 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 SMARCAD1Q9H4L7 1026 aa24.92■■□□□ 1.58
USF3-203ENST00000491165 RHOXF2BP0C7M4 288 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 CPT1AP50416 773 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 RINT1Q6NUQ1 792 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 TXLNBQ8N3L3 684 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 DDX12PQ92771 950 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 CCDC47Q96A33 483 aaKnown RBP24.91■■□□□ 1.58
USF3-203ENST00000491165 CEP89Q96ST8 783 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 RHOXF2Q9BQY4 288 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 ZBTB42B2RXF5 422 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 H3BRB1 525 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 XKR3Q5GH77 459 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 GNASQ5JWF2 1037 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 GPBP1Q86WP2 473 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 GBP3Q9H0R5 595 aa24.91■■□□□ 1.58
USF3-203ENST00000491165 TUT1Q9H6E5 874 aaKnown RBP24.91■■□□□ 1.58
USF3-203ENST00000491165 DBR1Q9UK59 544 aaKnown RBP24.91■■□□□ 1.58
USF3-203ENST00000491165 XKR9Q5GH70 373 aa24.9■■□□□ 1.58
USF3-203ENST00000491165 KCTD17Q8N5Z5 321 aa24.9■■□□□ 1.58
USF3-203ENST00000491165 CSGALNACT2Q8N6G5 542 aa24.9■■□□□ 1.58
USF3-203ENST00000491165 DNAJC19Q96DA6 116 aa24.9■■□□□ 1.58
USF3-203ENST00000491165 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.9■■□□□ 1.58
USF3-203ENST00000491165 EXOC1Q9NV70 894 aa24.9■■□□□ 1.58
USF3-203ENST00000491165 ERAP1Q9NZ08 941 aa24.9■■□□□ 1.58
USF3-203ENST00000491165 TRIM10Q9UDY6 481 aa24.9■■□□□ 1.58
USF3-203ENST00000491165 BICDL2A1A5D9 508 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 H3BQF6 201 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 F2P00734 622 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 MYCNP04198 464 aaPredicted RBP24.89■■□□□ 1.58
USF3-203ENST00000491165 NKX3-2P78367 333 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 PURAQ00577 322 aaKnown RBP24.89■■□□□ 1.58
USF3-203ENST00000491165 MTERF2Q49AM1 385 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 CCSAPQ6IQ19 270 aaPredicted RBP24.89■■□□□ 1.58
USF3-203ENST00000491165 FBXO46Q6PJ61 603 aaPredicted RBP24.89■■□□□ 1.58
USF3-203ENST00000491165 WDR59Q6PJI9 974 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 C1orf186Q6ZWK4 172 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 KLHDC9Q8NEP7 349 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 ZBTB10Q96DT7 871 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 TUBGCP2Q9BSJ2 902 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 ABCB6Q9NP58 842 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 L1RE1Q9UN81 338 aa24.89■■□□□ 1.58
USF3-203ENST00000491165 MYL3P08590 195 aa24.89■■□□□ 1.57
USF3-203ENST00000491165 KRT83P78385 493 aa24.89■■□□□ 1.57
USF3-203ENST00000491165 MEA1Q16626 185 aa24.89■■□□□ 1.57
USF3-203ENST00000491165 ATP8B4Q8TF62 1192 aa24.89■■□□□ 1.57
USF3-203ENST00000491165 TRAPPC12Q8WVT3 735 aa24.89■■□□□ 1.57
USF3-203ENST00000491165 CEP170P1Q96L14 293 aa24.89■■□□□ 1.57
USF3-203ENST00000491165 DUSP9Q99956 384 aaKnown RBP24.89■■□□□ 1.57
USF3-203ENST00000491165 C7orf25Q9BPX7 421 aa24.89■■□□□ 1.57
USF3-203ENST00000491165 NUP58Q9BVL2 599 aa24.89■■□□□ 1.57
USF3-203ENST00000491165 PAK6Q9NQU5 681 aaPredicted RBP24.89■■□□□ 1.57
USF3-203ENST00000491165 CYP26B1Q9NR63 512 aa24.89■■□□□ 1.57
USF3-203ENST00000491165 ANKEF1Q9NU02 776 aa24.89■■□□□ 1.57
USF3-203ENST00000491165 MYH11P35749 1972 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 SCN10AQ9Y5Y9 1956 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 CCNE1P24864 410 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 VSNL1P62760 191 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 PADI6Q6TGC4 694 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 TRAPPC11Q7Z392 1133 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 FAM114A1Q8IWE2 563 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 RETREG2Q8NC44 543 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 P2RX5Q93086 422 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 ARHGEF35A5YM69 484 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 RSPH10B2B2RC85 870 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 USO1O60763 962 aaKnown RBP24.88■■□□□ 1.57
USF3-203ENST00000491165 DKC1O60832 514 aaKnown RBP eCLIP24.88■■□□□ 1.57
USF3-203ENST00000491165 RSPH10BP0C881 870 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 SOX10P56693 466 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 TARBP2Q15633 366 aaKnown RBP24.88■■□□□ 1.57
USF3-203ENST00000491165 CCDC122Q5T0U0 273 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 CXCL17Q6UXB2 119 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 ZNF662Q6ZS27 426 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 BBXQ8WY36 941 aaPredicted RBP24.88■■□□□ 1.57
USF3-203ENST00000491165 REEP2Q9BRK0 252 aa24.88■■□□□ 1.57
USF3-203ENST00000491165 NIFKQ9BYG3 293 aaKnown RBP24.88■■□□□ 1.57
USF3-203ENST00000491165 TRIM21P19474 475 aaKnown RBP24.87■■□□□ 1.57
USF3-203ENST00000491165 PPP1R2P41236 205 aa24.87■■□□□ 1.57
USF3-203ENST00000491165 MAEAQ7L5Y9 396 aa24.87■■□□□ 1.57
USF3-203ENST00000491165 NOA1Q8NC60 698 aaKnown RBP24.87■■□□□ 1.57
USF3-203ENST00000491165 EHBP1Q8NDI1 1231 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms