RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 TMC5Q6UXY8 1006 aa23.23■■□□□ 1.31
CLIP2-208ENST00000491075 CCDC149Q6ZUS6 474 aa23.23■■□□□ 1.31
CLIP2-208ENST00000491075 BCL7CQ8WUZ0 217 aaPredicted RBP23.23■■□□□ 1.31
CLIP2-208ENST00000491075 FDXACB1Q9BRP7 624 aaPredicted RBP23.23■■□□□ 1.31
CLIP2-208ENST00000491075 FAM105AQ9NUU6 356 aa23.23■■□□□ 1.31
CLIP2-208ENST00000491075 INPP5FQ9Y2H2 1132 aa23.23■■□□□ 1.31
CLIP2-208ENST00000491075 IGKV6-21A0A0C4DH24 114 aa23.22■■□□□ 1.31
CLIP2-208ENST00000491075 SPDYE4A6NLX3 237 aa23.22■■□□□ 1.31
CLIP2-208ENST00000491075 ZNF623O75123 536 aa23.22■■□□□ 1.31
CLIP2-208ENST00000491075 IRX6P78412 446 aaPredicted RBP23.22■■□□□ 1.31
CLIP2-208ENST00000491075 PTPN14Q15678 1187 aa23.22■■□□□ 1.31
CLIP2-208ENST00000491075 OTOP3Q7RTS5 596 aa23.22■■□□□ 1.31
CLIP2-208ENST00000491075 MIER3Q7Z3K6 550 aa23.22■■□□□ 1.31
CLIP2-208ENST00000491075 GPR149Q86SP6 731 aa23.22■■□□□ 1.31
CLIP2-208ENST00000491075 PHKBQ93100 1093 aa23.22■■□□□ 1.31
CLIP2-208ENST00000491075 NKD2Q969F2 451 aaPredicted RBP23.22■■□□□ 1.31
CLIP2-208ENST00000491075 CEP89Q96ST8 783 aa23.22■■□□□ 1.31
CLIP2-208ENST00000491075 RNF26Q9BY78 433 aaPredicted RBP23.22■■□□□ 1.31
CLIP2-208ENST00000491075 EDIL3O43854 480 aa23.21■■□□□ 1.31
CLIP2-208ENST00000491075 PSMD10O75832 226 aa23.21■■□□□ 1.31
CLIP2-208ENST00000491075 LONRF3Q496Y0 759 aa23.21■■□□□ 1.31
CLIP2-208ENST00000491075 CWF19L1Q69YN2 538 aaKnown RBP23.21■■□□□ 1.31
CLIP2-208ENST00000491075 Q6ZUG5 572 aa23.21■■□□□ 1.31
CLIP2-208ENST00000491075 BRF1Q92994 677 aa23.21■■□□□ 1.31
CLIP2-208ENST00000491075 EMILIN2Q9BXX0 1053 aa23.21■■□□□ 1.31
CLIP2-208ENST00000491075 GBP3Q9H0R5 595 aa23.21■■□□□ 1.31
CLIP2-208ENST00000491075 DNAJB4Q9UDY4 337 aa23.21■■□□□ 1.31
CLIP2-208ENST00000491075 OFD1O75665 1012 aa23.2■■□□□ 1.3
CLIP2-208ENST00000491075 SLC11A1P49279 550 aa23.2■■□□□ 1.3
CLIP2-208ENST00000491075 TDGQ13569 410 aa23.2■■□□□ 1.3
CLIP2-208ENST00000491075 CATSPER4Q7RTX7 472 aa23.2■■□□□ 1.3
CLIP2-208ENST00000491075 FRMD5Q7Z6J6 570 aa23.2■■□□□ 1.3
CLIP2-208ENST00000491075 RHPN2Q8IUC4 686 aa23.2■■□□□ 1.3
CLIP2-208ENST00000491075 FLCNQ8NFG4 579 aa23.2■■□□□ 1.3
CLIP2-208ENST00000491075 URGCPQ8TCY9 931 aa23.2■■□□□ 1.3
CLIP2-208ENST00000491075 PGBD4Q96DM1 585 aa23.2■■□□□ 1.3
CLIP2-208ENST00000491075 VN1R3Q9BXE9 311 aa23.2■■□□□ 1.3
CLIP2-208ENST00000491075 SUCLA2Q9P2R7 463 aaPredicted RBP23.2■■□□□ 1.3
CLIP2-208ENST00000491075 DCHS1Q96JQ0 3298 aa23.2■■□□□ 1.3
CLIP2-208ENST00000491075 TMEM150BA6NC51 233 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 MEIS3P2A8K0S8 358 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 MAFO75444 373 aaPredicted RBP23.19■■□□□ 1.3
CLIP2-208ENST00000491075 STBD1O95210 358 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 CPA1P15085 419 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 AOC1P19801 751 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 CLCN4P51793 760 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 C15orf39Q6ZRI6 1047 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 GJA10Q969M2 543 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 JPH2Q9BR39 696 aaPredicted RBP23.19■■□□□ 1.3
CLIP2-208ENST00000491075 C22orf23Q9BZE7 217 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 VPS54Q9P1Q0 977 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 DUSP12Q9UNI6 340 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 WDR87Q6ZQQ6 2873 aa23.19■■□□□ 1.3
CLIP2-208ENST00000491075 KLRC2P26717 231 aa23.18■■□□□ 1.3
CLIP2-208ENST00000491075 NTRK3Q16288 839 aa23.18■■□□□ 1.3
CLIP2-208ENST00000491075 Q4G0T1 1027 aa23.18■■□□□ 1.3
CLIP2-208ENST00000491075 B3GNT9Q6UX72 402 aa23.18■■□□□ 1.3
CLIP2-208ENST00000491075 TBCKQ8TEA7 893 aa23.18■■□□□ 1.3
CLIP2-208ENST00000491075 NLRP4Q96MN2 994 aa23.18■■□□□ 1.3
CLIP2-208ENST00000491075 KLHL5Q96PQ7 755 aa23.18■■□□□ 1.3
CLIP2-208ENST00000491075 SLC26A6Q9BXS9 759 aa23.18■■□□□ 1.3
CLIP2-208ENST00000491075 SH3GLB2Q9NR46 395 aa23.18■■□□□ 1.3
CLIP2-208ENST00000491075 AGPAT5Q9NUQ2 364 aa23.18■■□□□ 1.3
CLIP2-208ENST00000491075 IFNAR1P17181 557 aa23.17■■□□□ 1.3
CLIP2-208ENST00000491075 LETM2Q2VYF4 491 aa23.17■■□□□ 1.3
CLIP2-208ENST00000491075 ZNF280BQ86YH2 543 aa23.17■■□□□ 1.3
CLIP2-208ENST00000491075 CCDC105Q8IYK2 499 aa23.17■■□□□ 1.3
CLIP2-208ENST00000491075 FBXL16Q8N461 479 aa23.17■■□□□ 1.3
CLIP2-208ENST00000491075 FEZF2Q8TBJ5 459 aa23.17■■□□□ 1.3
CLIP2-208ENST00000491075 JAKMIP1Q96N16 626 aaKnown RBP23.17■■□□□ 1.3
CLIP2-208ENST00000491075 RTP3Q9BQQ7 232 aa23.17■■□□□ 1.3
CLIP2-208ENST00000491075 SH2D3AQ9BRG2 576 aa23.17■■□□□ 1.3
CLIP2-208ENST00000491075 TMEM175Q9BSA9 504 aa23.17■■□□□ 1.3
CLIP2-208ENST00000491075 FBXL21Q9UKT6 434 aa23.17■■□□□ 1.3
CLIP2-208ENST00000491075 PCDHB2Q9Y5E7 798 aa23.17■■□□□ 1.3
CLIP2-208ENST00000491075 CNTNAP2Q9UHC6 1331 aa23.16■■□□□ 1.3
CLIP2-208ENST00000491075 B4GALT3O60512 393 aa23.16■■□□□ 1.3
CLIP2-208ENST00000491075 CNPP09543 421 aaKnown RBP23.16■■□□□ 1.3
CLIP2-208ENST00000491075 NPR3P17342 541 aa23.16■■□□□ 1.3
CLIP2-208ENST00000491075 NLRP5P59047 1200 aa23.16■■□□□ 1.3
CLIP2-208ENST00000491075 BLOC1S2Q6QNY1 142 aa23.16■■□□□ 1.3
CLIP2-208ENST00000491075 AGMOQ6ZNB7 445 aa23.16■■□□□ 1.3
CLIP2-208ENST00000491075 KSR1Q8IVT5 923 aa23.16■■□□□ 1.3
CLIP2-208ENST00000491075 KCNK12Q9HB15 430 aa23.16■■□□□ 1.3
CLIP2-208ENST00000491075 MRPL17Q9NRX2 175 aaKnown RBP23.16■■□□□ 1.3
CLIP2-208ENST00000491075 IGSF9Q9P2J2 1179 aa23.16■■□□□ 1.3
CLIP2-208ENST00000491075 KANSL3Q9P2N6 904 aa23.16■■□□□ 1.3
CLIP2-208ENST00000491075 GVINP1Q7Z2Y8 2422 aa23.16■■□□□ 1.3
CLIP2-208ENST00000491075 CYP3A7-CYP3A51PA0A087WV96 503 aa23.15■■□□□ 1.3
CLIP2-208ENST00000491075 DDX11L8A8MPP1 907 aa23.15■■□□□ 1.3
CLIP2-208ENST00000491075 CDC45O75419 566 aa23.15■■□□□ 1.3
CLIP2-208ENST00000491075 SSBP05455 408 aaKnown RBP eCLIP23.15■■□□□ 1.3
CLIP2-208ENST00000491075 CYP3A7P24462 503 aa23.15■■□□□ 1.3
CLIP2-208ENST00000491075 ERMP1Q7Z2K6 904 aa23.15■■□□□ 1.3
CLIP2-208ENST00000491075 ADSSL1Q8N142 457 aa23.15■■□□□ 1.3
CLIP2-208ENST00000491075 SIX5Q8N196 739 aa23.15■■□□□ 1.3
CLIP2-208ENST00000491075 CMASQ8NFW8 434 aaPredicted RBP23.15■■□□□ 1.3
CLIP2-208ENST00000491075 KCNB2Q92953 911 aa23.15■■□□□ 1.3
CLIP2-208ENST00000491075 FAM193BQ96PV7 902 aaPredicted RBP23.15■■□□□ 1.3
CLIP2-208ENST00000491075 AGXT2Q9BYV1 514 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms