RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 ZNF713Q8N859 430 aaPredicted RBP17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 ST13P5Q8NFI4 369 aaPredicted RBP17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 LENG9Q96B70 501 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 KLHL5Q96PQ7 755 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 HINFPQ9BQA5 517 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 MAN1C1Q9NR34 630 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 SEPT9Q9UHD8 586 aaPredicted RBP17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 NAP1L2Q9ULW6 460 aaPredicted RBP17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 A0A087WZ62 844 aa17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 GBP2P32456 591 aaPredicted RBP17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 AFF1P51825 1210 aaKnown RBP17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 GIT2Q14161 759 aa17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 MTERF2Q49AM1 385 aa17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 TEX2Q8IWB9 1127 aa17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 REXO1Q8N1G1 1221 aaKnown RBP17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 FDXACB1Q9BRP7 624 aaPredicted RBP17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 GCOM2Q9BZD3 368 aaPredicted RBP17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 DISC1Q9NRI5 854 aa17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 FAM217BQ9NTX9 383 aaPredicted RBP17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 FAM105AQ9NUU6 356 aa17.28■□□□□ 0.36
SCAMP3-208ENST00000490999 GPR179Q6PRD1 2367 aa17.27■□□□□ 0.36
SCAMP3-208ENST00000490999 KLF18A0A0U1RQI7 1052 aa17.27■□□□□ 0.36
SCAMP3-208ENST00000490999 DCNP07585 359 aaKnown RBP17.27■□□□□ 0.36
SCAMP3-208ENST00000490999 SFPQP23246 707 aaKnown RBP eCLIP17.27■□□□□ 0.36
SCAMP3-208ENST00000490999 PPFIBP1Q86W92 1011 aa17.27■□□□□ 0.36
SCAMP3-208ENST00000490999 EMILIN2Q9BXX0 1053 aa17.27■□□□□ 0.36
SCAMP3-208ENST00000490999 GLT8D2Q9H1C3 349 aa17.27■□□□□ 0.36
SCAMP3-208ENST00000490999 TBC1D17Q9HA65 648 aa17.27■□□□□ 0.36
SCAMP3-208ENST00000490999 C2orf16Q68DN1 1984 aa17.27■□□□□ 0.36
SCAMP3-208ENST00000490999 OFD1O75665 1012 aa17.26■□□□□ 0.35
SCAMP3-208ENST00000490999 NECTIN1Q15223 517 aa17.26■□□□□ 0.35
SCAMP3-208ENST00000490999 PFKFB3Q16875 520 aaPredicted RBP17.26■□□□□ 0.35
SCAMP3-208ENST00000490999 KSR1Q8IVT5 923 aa17.26■□□□□ 0.35
SCAMP3-208ENST00000490999 NLRP4Q96MN2 994 aa17.26■□□□□ 0.35
SCAMP3-208ENST00000490999 MYADMQ96S97 322 aa17.26■□□□□ 0.35
SCAMP3-208ENST00000490999 ESYT1Q9BSJ8 1104 aa17.26■□□□□ 0.35
SCAMP3-208ENST00000490999 UNC45AQ9H3U1 944 aa17.26■□□□□ 0.35
SCAMP3-208ENST00000490999 NRBP2Q9NSY0 501 aa17.26■□□□□ 0.35
SCAMP3-208ENST00000490999 PRG3Q9Y2Y8 225 aaPredicted RBP17.26■□□□□ 0.35
SCAMP3-208ENST00000490999 OTOGLQ3ZCN5 2332 aa17.26■□□□□ 0.35
SCAMP3-208ENST00000490999 CLUHO75153 1309 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 MSH4O15457 936 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 RFPL2O75678 378 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 DDHD2O94830 711 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 AK2P54819 239 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 TARBP2Q15633 366 aaKnown RBP17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 C15orf39Q6ZRI6 1047 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 CATSPER4Q7RTX7 472 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 RHPN2Q8IUC4 686 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 DCLK2Q8N568 766 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 GPR152Q8TDT2 470 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 CHST12Q9NRB3 414 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 IGSF9Q9P2J2 1179 aa17.25■□□□□ 0.35
SCAMP3-208ENST00000490999 COL4A3Q01955 1670 aa17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 GAS7O60861 476 aa17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 POMCP01189 267 aa17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 ADD1P35611 737 aaKnown RBP17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 AGMOQ6ZNB7 445 aa17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 ZNF710Q8N1W2 664 aa17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 URGCPQ8TCY9 931 aa17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 TRAIPQ9BWF2 469 aa17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 ZMYND12Q9H0C1 365 aa17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 C6orf50Q9HD87 102 aa17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 MRPL17Q9NRX2 175 aaKnown RBP17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 MARCH5Q9NX47 278 aa17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 PCDHB2Q9Y5E7 798 aa17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 MYH9P35579 1960 aaKnown RBP17.24■□□□□ 0.35
SCAMP3-208ENST00000490999 CCDC195A0A1B0GUA6 201 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 ESYT2A0FGR8 921 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 POTEMA6NI47 508 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 F8W810 466 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 INPPL1O15357 1258 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 TEX28O15482 410 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 EDIL3O43854 480 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 LILRB3O75022 631 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 URODP06132 367 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 SPATA31D3P0C874 917 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 RAB27AP51159 221 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 EXOSC10Q01780 885 aaKnown RBP17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 ADCK5Q3MIX3 580 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 LRCH2Q5VUJ6 765 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 PLA2G4FQ68DD2 849 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 POTEGQ6S5H5 508 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 SPATA31D4Q6ZUB0 917 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 GET4Q7L5D6 327 aaPredicted RBP17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 TAS1R1Q7RTX1 841 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 CEP89Q96ST8 783 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 FOXQ1Q9C009 403 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 ARHGEF3Q9NR81 526 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 SUCLA2Q9P2R7 463 aaPredicted RBP17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 WNT16Q9UBV4 365 aa17.23■□□□□ 0.35
SCAMP3-208ENST00000490999 CACNA1BQ00975 2339 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 LRRN2O75325 713 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 SP9P0CG40 484 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 SRFP11831 508 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 CIITAP33076 1130 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 JAK3P52333 1124 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 SLC44A3Q8N4M1 653 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 SMG7Q92540 1137 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms