RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 SEMA6BQ9H3T3 888 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 AIPL1Q9NZN9 384 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 PHTF1Q9UMS5 762 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 AFF2P51816 1311 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 PTPRUQ92729 1446 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 PNPLA7Q6ZV29 1317 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 CCDC189A1A4V9 331 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 TTC36A6NLP5 189 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 FAM200BP0CF97 657 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 POLGP54098 1239 aaPredicted RBP12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 BFSP1Q12934 665 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 GRIK3Q13003 919 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 DRAP1Q14919 205 aaPredicted RBP12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 SPDYCQ5MJ68 293 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 TMED8Q6PL24 325 aaPredicted RBP12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 DGKHQ86XP1 1220 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 IRF2BP1Q8IU81 584 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 KLHL23Q8NBE8 558 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 C1orf54Q8WWF1 131 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 TMEM237Q96Q45 408 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 BRIP1Q9BX63 1249 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 RAB20Q9NX57 234 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 ANKFY1Q9P2R3 1169 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 RTN3O95197 1032 aaPredicted RBP12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 SLC9A1P19634 815 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 ESRRGP62508 458 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 SLC44A4Q53GD3 710 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 CCDC125Q86Z20 511 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 FAM178BQ8IXR5 827 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 PRPF31Q8WWY3 499 aaKnown RBP12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 ITFG2Q969R8 447 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 C9orf72Q96LT7 481 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 ANKRD2Q9GZV1 360 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 SLC12A6Q9UHW9 1150 aa12.07□□□□□ -0.48
CRNKL1-204ENST00000490910 BAZ2BQ9UIF8 2168 aaKnown RBP12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 C5orf60A6NFR6 353 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 ZNF263O14978 683 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 UNC5CO95185 931 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 THOC5Q13769 683 aaKnown RBP12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 LRRC36Q1X8D7 754 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 WDR78Q5VTH9 848 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 PPP4R1Q8TF05 950 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 TTC25Q96NG3 672 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 WNT8AQ9H1J5 351 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 UBE2TQ9NPD8 197 aaPredicted RBP12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 PNMA3Q9UL41 463 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 PCDHA6Q9UN73 950 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 PCDHA8Q9Y5H6 950 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 CNTNAP5Q8WYK1 1306 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 DLATP10515 647 aaKnown RBP12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 ITIH2P19823 946 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 PTPN4P29074 926 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 EPHB2P29323 1055 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 GSTT1P30711 240 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 HNRNPH3P31942 346 aaKnown RBP12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 KCNJ1P48048 391 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 PTDSS1P48651 473 aaKnown RBP12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 PTENP60484 403 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 MMEL1Q495T6 779 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 NAALADL2Q58DX5 795 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 CENPUQ71F23 418 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 ANO5Q75V66 913 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 SMYD3Q9H7B4 428 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 IFT122Q9HBG6 1241 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 PRM3Q9NNZ6 103 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 HEG1Q9ULI3 1381 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 PFASO15067 1338 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 SNAP23O00161 211 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 FTLP02792 175 aaPredicted RBP12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 SHBGP04278 402 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 CYP4A11Q02928 519 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 SLFN12Q8IYM2 578 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 ICA1LQ8NDH6 482 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 METTL5Q9NRN9 209 aaKnown RBP12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 NEO1Q92859 1461 aa12.06□□□□□ -0.48
CRNKL1-204ENST00000490910 EME2A4GXA9 379 aaPredicted RBP12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 ARHGEF35A5YM69 484 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 SOX5P35711 763 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 EPHB1P54762 984 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 CNGA2Q16280 664 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 DCUN1D2Q6PH85 259 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 NLRP9Q7RTR0 991 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 MAPKAPK5Q8IW41 473 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 C4orf33Q8N1A6 199 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 TAB3Q8N5C8 712 aaPredicted RBP12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 SLC26A7Q8TE54 656 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 RSAD2Q8WXG1 361 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 PIGSQ96S52 555 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 PSTPIP2Q9H939 334 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 BARHL2Q9NY43 387 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 NDUFA13Q9P0J0 144 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 A8MUI8 341 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 ERVV-2B6SEH9 535 aa12.05□□□□□ -0.48
CRNKL1-204ENST00000490910 UPP2O95045 317 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms