RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 PLA2G4FQ68DD2 849 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 KIAA1841Q6NSI8 718 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 ETNPPLQ8TBG4 499 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 TBCKQ8TEA7 893 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 RIPOR3Q96MK2 946 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 SCLT1Q96NL6 688 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 AIFM3Q96NN9 605 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 RIT2Q99578 217 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 FDXACB1Q9BRP7 624 aaPredicted RBP9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 SLC26A6Q9BXS9 759 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 MRPL9Q9BYD2 267 aaKnown RBP9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 TBC1D13Q9NVG8 400 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 RNF216Q9NWF9 866 aaPredicted RBP9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 WRAP73Q9P2S5 460 aaPredicted RBP9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 TCEAL9Q9UHQ7 104 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 SORCS3Q9UPU3 1222 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 PIN4Q9Y237 131 aaKnown RBP9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 OTOGLQ3ZCN5 2332 aa9.49□□□□□ -0.89
PCOLCE-209ENST00000490909 PATJQ8NI35 1801 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 GFRA3O60609 400 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 PFKFB2O60825 505 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 GAS7O60861 476 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 CDKL5O76039 1030 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 CTSAP10619 480 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 ZSCAN20P17040 1043 aaPredicted RBP9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 TMOD1P28289 359 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 GNA11P29992 359 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 SLC11A1P49279 550 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 ITIH3Q06033 890 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 ANO5Q75V66 913 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 ASCL5Q7RTU5 278 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 ZBTB33Q86T24 672 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 KSR1Q8IVT5 923 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 VPS52Q8N1B4 723 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 CCDC148Q8NFR7 591 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 CCDC12Q8WUD4 166 aaPredicted RBP9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 SLC22A17Q8WUG5 538 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 SNX21Q969T3 373 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 TMEM169Q96HH4 297 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 IGSF21Q96ID5 467 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 MBOAT7Q96N66 472 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 PRRX2Q99811 253 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 TRAIPQ9BWF2 469 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 TEKT3Q9BXF9 490 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 SLKQ9H2G2 1235 aaPredicted RBP9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 NRDE2Q9H7Z3 1164 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 PUF60Q9UHX1 559 aaKnown RBP9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 VAV3Q9UKW4 847 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 INPP5FQ9Y2H2 1132 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 IRAK3Q9Y616 596 aa9.48□□□□□ -0.89
PCOLCE-209ENST00000490909 EML1O00423 815 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 GALR2O43603 387 aaPredicted RBP9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 N4BP1O75113 896 aaKnown RBP9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 EOMESO95936 686 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 SFNP31947 248 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 CA8P35219 290 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 CCT2P78371 535 aaKnown RBP9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 KRT17Q04695 432 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 Q4G0T1 1027 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 TPRNQ4KMQ1 711 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 UBXN11Q5T124 520 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 MCTP2Q6DN12 878 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 MIER3Q7Z3K6 550 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 ZNF280BQ86YH2 543 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 FAM177A1Q8N128 213 aaPredicted RBP9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 ZNF579Q8NAF0 562 aaKnown RBP9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 TDRD5Q8NAT2 981 aaKnown RBP9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 NLRP4Q96MN2 994 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 NECTIN4Q96NY8 510 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 LLPHQ9BRT6 129 aaKnown RBP9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 NIFKQ9BYG3 293 aaKnown RBP9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 MINDY3Q9H8M7 445 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 IFT122Q9HBG6 1241 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 BMP2KQ9NSY1 1161 aaPredicted RBP9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 AGPAT5Q9NUQ2 364 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 FAM105AQ9NUU6 356 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 MARCH5Q9NX47 278 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 DACT1Q9NYF0 836 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 NR2E1Q9Y466 385 aa9.47□□□□□ -0.89
PCOLCE-209ENST00000490909 MIA3Q5JRA6 1907 aa9.46□□□□□ -0.89
PCOLCE-209ENST00000490909 GPR179Q6PRD1 2367 aa9.46□□□□□ -0.89
PCOLCE-209ENST00000490909 NCOR2Q9Y618 2525 aa9.46□□□□□ -0.89
PCOLCE-209ENST00000490909 CYP3A7-CYP3A51PA0A087WV96 503 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 PRR23AA6NEV1 266 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 PROB1E7EW31 1015 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 F8W810 466 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 CPLX1O14810 134 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 DTNBO60941 627 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 MAFO75444 373 aaPredicted RBP9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 OFD1O75665 1012 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 DDHD2O94830 711 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 GALTP07902 379 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 SFPQP23246 707 aaKnown RBP eCLIP9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 CYP3A7P24462 503 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 MTHFRP42898 656 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 ALDH7A1P49419 539 aaKnown RBP9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 USP11P51784 963 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 XKR3Q5GH77 459 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 NOMO2Q5JPE7 1267 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 TWF2Q6IBS0 349 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms