RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 PCDHB11Q9Y5F2 797 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 VWA3AA6NCI4 1184 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 LPXNO60711 386 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 ATG7O95352 703 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 CYP3A4P08684 503 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 OR52Z1P0C646 297 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 GCFC2P16383 781 aaKnown RBP8.46□□□□□ -1.06
CLDN1-202ENST00000490800 FSHRP23945 695 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 PRPHP41219 470 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 ZNF445P59923 1031 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 TFF2Q03403 129 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 MTMR1Q13613 665 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 MOXD1Q6UVY6 613 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 USP49Q70CQ1 688 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 MYOCDQ8IZQ8 938 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 LMBR1Q8WVP7 490 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 GLG1Q92896 1179 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 MTMR9Q96QG7 549 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 NAP1L4Q99733 375 aaKnown RBP8.46□□□□□ -1.06
CLDN1-202ENST00000490800 MXRA8Q9BRK3 442 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 NUP62CLQ9H1M0 184 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 KCNH7Q9NS40 1196 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 GBF1Q92538 1859 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 EMSYQ7Z589 1322 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 NRCAMQ92823 1304 aa8.46□□□□□ -1.06
CLDN1-202ENST00000490800 SYCE3A1L190 88 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 LINC01553A4QN01 128 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 ESPNB1AK53 854 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 KINO60870 393 aaKnown RBP8.45□□□□□ -1.06
CLDN1-202ENST00000490800 UPP2O95045 317 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 ZNF202O95125 648 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 CHRNA1P02708 482 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 AMHP03971 560 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 ARP10275 920 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 BMP1P13497 986 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 MARK3P27448 753 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 CIITAP33076 1130 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 LONP1P36776 959 aaKnown RBP8.45□□□□□ -1.06
CLDN1-202ENST00000490800 SYKP43405 635 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 ERVK-21P61565 698 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 CAMK4Q16566 473 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 CALCRLQ16602 461 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 INTS6LQ5JSJ4 861 aaKnown RBP8.45□□□□□ -1.06
CLDN1-202ENST00000490800 FAM26DQ5JW98 314 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 DTHD1Q6ZMT9 781 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 RUFY4Q6ZNE9 571 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 RBM43Q6ZSC3 357 aaKnown RBP8.45□□□□□ -1.06
CLDN1-202ENST00000490800 SEPT8Q92599 483 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 TOP1MTQ969P6 601 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 EPSTI1Q96J88 318 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 TGS1Q96RS0 853 aaKnown RBP8.45□□□□□ -1.06
CLDN1-202ENST00000490800 SMARCAD1Q9H4L7 1026 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 EHMT1Q9H9B1 1298 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 SUGCTQ9HAC7 445 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 FAM13BQ9NYF5 915 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 ERAP1Q9NZ08 941 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 DDX25Q9UHL0 483 aaKnown RBP8.45□□□□□ -1.06
CLDN1-202ENST00000490800 KCNH3Q9ULD8 1083 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 INSL6Q9Y581 213 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 XIRP2A4UGR9 3374 aa8.45□□□□□ -1.06
CLDN1-202ENST00000490800 A0A087X0B3 334 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.44□□□□□ -1.06
CLDN1-202ENST00000490800 CARNS1A5YM72 827 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 FAM86B1E9PN63 330 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 TNFRSF10AO00220 468 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 CAND2O75155 1236 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 LETM1O95202 739 aaPredicted RBP8.44□□□□□ -1.06
CLDN1-202ENST00000490800 FAM86B2P0C5J1 330 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 INSRRP14616 1297 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 KCNQ1P51787 676 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 IGBP1P78318 339 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 HTRA4P83105 476 aaPredicted RBP8.44□□□□□ -1.06
CLDN1-202ENST00000490800 PPFIA1Q13136 1202 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 GRIK4Q16099 956 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 Q4G0T1 1027 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 CRTC2Q53ET0 693 aaPredicted RBP8.44□□□□□ -1.06
CLDN1-202ENST00000490800 CEP55Q53EZ4 464 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 MARCH8Q5T0T0 291 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 GAS2L3Q86XJ1 694 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 GDPD5Q8WTR4 605 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 DNAJB3Q8WWF6 145 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 HAS1Q92839 578 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 LENG9Q96B70 501 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 ZBTB10Q96DT7 871 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 TIGD1Q96MW7 591 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 PCYT2Q99447 389 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 C17orf80Q9BSJ5 609 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 TRAIPQ9BWF2 469 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 TNMDQ9H2S6 317 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 JPH1Q9HDC5 661 aaPredicted RBP8.44□□□□□ -1.06
CLDN1-202ENST00000490800 KCNMB3Q9NPA1 279 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 LMCD1Q9NZU5 365 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 SLC9A2Q9UBY0 812 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 MAP4K5Q9Y4K4 846 aa8.44□□□□□ -1.06
CLDN1-202ENST00000490800 TANC1Q9C0D5 1861 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 IGLV3-22A0A075B6J6 115 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 FSD2A1L4K1 749 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 PP2D1A8MPX8 630 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 MEIS1O00470 390 aa8.43□□□□□ -1.06
CLDN1-202ENST00000490800 ENPP3O14638 875 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms