RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 MED24O75448 989 aa34.92■■■■□ 3.18
LDB1-204ENST00000490751 U2AF2P26368 475 aaKnown RBP eCLIP34.92■■■■□ 3.18
LDB1-204ENST00000490751 RAB27AP51159 221 aa34.92■■■■□ 3.18
LDB1-204ENST00000490751 MXD4Q14582 209 aaPredicted RBP34.92■■■■□ 3.18
LDB1-204ENST00000490751 NBR1Q14596 966 aa34.92■■■■□ 3.18
LDB1-204ENST00000490751 KCNT2Q6UVM3 1135 aa34.92■■■■□ 3.18
LDB1-204ENST00000490751 CATSPER3Q86XQ3 398 aa34.92■■■■□ 3.18
LDB1-204ENST00000490751 LPPQ93052 612 aa34.92■■■■□ 3.18
LDB1-204ENST00000490751 KIF3AQ9Y496 699 aa34.92■■■■□ 3.18
LDB1-204ENST00000490751 PCDHGC5Q9Y5F6 944 aa34.92■■■■□ 3.18
LDB1-204ENST00000490751 XRCC6P12956 609 aaKnown RBP eCLIP34.91■■■■□ 3.183e-6■■■□□ 15.3
LDB1-204ENST00000490751 LTBRP36941 435 aa34.91■■■■□ 3.18
LDB1-204ENST00000490751 LONRF3Q496Y0 759 aa34.91■■■■□ 3.18
LDB1-204ENST00000490751 ZNF558Q96NG5 402 aa34.91■■■■□ 3.18
LDB1-204ENST00000490751 MRPL9Q9BYD2 267 aaKnown RBP34.91■■■■□ 3.18
LDB1-204ENST00000490751 TLR9Q9NR96 1032 aa34.91■■■■□ 3.18
LDB1-204ENST00000490751 IL9P15248 144 aa34.9■■■■□ 3.18
LDB1-204ENST00000490751 PBX3P40426 434 aa34.9■■■■□ 3.18
LDB1-204ENST00000490751 PUS10Q3MIT2 529 aaKnown RBP34.9■■■■□ 3.18
LDB1-204ENST00000490751 ERMNQ8TAM6 284 aa34.9■■■■□ 3.18
LDB1-204ENST00000490751 ASAP3Q8TDY4 903 aa34.9■■■■□ 3.18
LDB1-204ENST00000490751 MICAL1Q8TDZ2 1067 aa34.9■■■■□ 3.18
LDB1-204ENST00000490751 TBC1D32Q96NH3 1257 aa34.9■■■■□ 3.18
LDB1-204ENST00000490751 POLR3CQ9BUI4 534 aaPredicted RBP34.9■■■■□ 3.18
LDB1-204ENST00000490751 LINC01565O15544 149 aa34.89■■■■□ 3.18
LDB1-204ENST00000490751 USO1O60763 962 aaKnown RBP34.89■■■■□ 3.18
LDB1-204ENST00000490751 ZNF623O75123 536 aa34.89■■■■□ 3.18
LDB1-204ENST00000490751 TFDP1Q14186 410 aa34.89■■■■□ 3.18
LDB1-204ENST00000490751 GRXCR2A6NFK2 248 aa34.88■■■■□ 3.17
LDB1-204ENST00000490751 MEIS3P2A8K0S8 358 aa34.88■■■■□ 3.17
LDB1-204ENST00000490751 PPM1AP35813 382 aa34.88■■■■□ 3.17
LDB1-204ENST00000490751 ARL2P36404 184 aa34.88■■■■□ 3.17
LDB1-204ENST00000490751 PTENP60484 403 aa34.88■■■■□ 3.17
LDB1-204ENST00000490751 ERVFC1P60507 584 aa34.88■■■■□ 3.17
LDB1-204ENST00000490751 PLCB3Q01970 1234 aa34.88■■■■□ 3.17
LDB1-204ENST00000490751 DLX2Q07687 328 aaPredicted RBP34.88■■■■□ 3.17
LDB1-204ENST00000490751 CAPSQ13938 189 aa34.88■■■■□ 3.17
LDB1-204ENST00000490751 C4orf32Q8N8J7 132 aa34.88■■■■□ 3.17
LDB1-204ENST00000490751 MRPS27Q92552 414 aaKnown RBP34.88■■■■□ 3.17
LDB1-204ENST00000490751 PCDHB2Q9Y5E7 798 aa34.88■■■■□ 3.17
LDB1-204ENST00000490751 ERLIN2O94905 339 aa34.87■■■■□ 3.17
LDB1-204ENST00000490751 HOXA11P31270 313 aaPredicted RBP34.87■■■■□ 3.17
LDB1-204ENST00000490751 NRIP1P48552 1158 aa34.87■■■■□ 3.17
LDB1-204ENST00000490751 TOB1P50616 345 aaPredicted RBP34.87■■■■□ 3.17
LDB1-204ENST00000490751 POTEGQ6S5H5 508 aa34.87■■■■□ 3.17
LDB1-204ENST00000490751 GLB1LQ6UWU2 654 aa34.87■■■■□ 3.17
LDB1-204ENST00000490751 RBM23Q86U06 439 aaKnown RBP34.87■■■■□ 3.17
LDB1-204ENST00000490751 RSPH1Q8WYR4 309 aa34.87■■■■□ 3.17
LDB1-204ENST00000490751 NACC1Q96RE7 527 aa34.87■■■■□ 3.17
LDB1-204ENST00000490751 POLR3FQ9H1D9 316 aaPredicted RBP34.87■■■■□ 3.17
LDB1-204ENST00000490751 LZTS1Q9Y250 596 aa34.87■■■■□ 3.17
LDB1-204ENST00000490751 TBX10O75333 385 aa34.86■■■■□ 3.17
LDB1-204ENST00000490751 GLRA2P23416 452 aa34.86■■■■□ 3.17
LDB1-204ENST00000490751 RPA1P27694 616 aa34.86■■■■□ 3.17
LDB1-204ENST00000490751 ADAM15Q13444 863 aa34.86■■■■□ 3.17
LDB1-204ENST00000490751 IFNLR1Q8IU57 520 aaPredicted RBP34.86■■■■□ 3.17
LDB1-204ENST00000490751 PGBD4Q96DM1 585 aa34.86■■■■□ 3.17
LDB1-204ENST00000490751 SPG21Q9NZD8 308 aa34.86■■■■□ 3.17
LDB1-204ENST00000490751 PUF60Q9UHX1 559 aaKnown RBP34.86■■■■□ 3.17
LDB1-204ENST00000490751 DBR1Q9UK59 544 aaKnown RBP34.86■■■■□ 3.17
LDB1-204ENST00000490751 INPP5FQ9Y2H2 1132 aa34.86■■■■□ 3.17
LDB1-204ENST00000490751 BDP1A6H8Y1 2624 aa34.86■■■■□ 3.17
LDB1-204ENST00000490751 INO80B-WBP1J3KQ70 363 aa34.85■■■■□ 3.17
LDB1-204ENST00000490751 MCM2P49736 904 aa34.85■■■■□ 3.17
LDB1-204ENST00000490751 FXR2P51116 673 aaKnown RBP eCLIP34.85■■■■□ 3.17
LDB1-204ENST00000490751 POU5F1BQ06416 359 aa34.85■■■■□ 3.17
LDB1-204ENST00000490751 CLUL1Q15846 466 aa34.85■■■■□ 3.17
LDB1-204ENST00000490751 UBXN11Q5T124 520 aa34.85■■■■□ 3.17
LDB1-204ENST00000490751 EFHBQ8N7U6 833 aa34.85■■■■□ 3.17
LDB1-204ENST00000490751 PCDHB6Q9Y5E3 794 aa34.85■■■■□ 3.17
LDB1-204ENST00000490751 FSCN2O14926 492 aa34.84■■■■□ 3.17
LDB1-204ENST00000490751 TSPAN1O60635 241 aa34.84■■■■□ 3.17
LDB1-204ENST00000490751 GJB2P29033 226 aa34.84■■■■□ 3.17
LDB1-204ENST00000490751 NDUFV1P49821 464 aa34.84■■■■□ 3.17
LDB1-204ENST00000490751 PCBP1Q15365 356 aaKnown RBP eCLIP34.84■■■■□ 3.172e-9■■■■■ 29.1
LDB1-204ENST00000490751 HAUS3Q68CZ6 603 aa34.84■■■■□ 3.17
LDB1-204ENST00000490751 MAEAQ7L5Y9 396 aa34.84■■■■□ 3.17
LDB1-204ENST00000490751 FAM178BQ8IXR5 827 aa34.84■■■■□ 3.17
LDB1-204ENST00000490751 SLC39A11Q8N1S5 342 aa34.84■■■■□ 3.17
LDB1-204ENST00000490751 TLE6Q9H808 572 aa34.84■■■■□ 3.17
LDB1-204ENST00000490751 GPRC5CQ9NQ84 441 aa34.84■■■■□ 3.17
LDB1-204ENST00000490751 OFD1O75665 1012 aa34.83■■■■□ 3.17
LDB1-204ENST00000490751 BCAR1P56945 870 aa34.83■■■■□ 3.17
LDB1-204ENST00000490751 KRT17Q04695 432 aa34.83■■■■□ 3.17
LDB1-204ENST00000490751 MBTD1Q05BQ5 628 aa34.83■■■■□ 3.17
LDB1-204ENST00000490751 PTGDRQ13258 359 aa34.83■■■■□ 3.17
LDB1-204ENST00000490751 NOMO2Q5JPE7 1267 aa34.83■■■■□ 3.17
LDB1-204ENST00000490751 PLPP4Q5VZY2 271 aa34.83■■■■□ 3.17
LDB1-204ENST00000490751 MCTP1Q6DN14 999 aa34.83■■■■□ 3.17
LDB1-204ENST00000490751 PDE12Q6L8Q7 609 aaKnown RBP34.83■■■■□ 3.17
LDB1-204ENST00000490751 TBC1D13Q9NVG8 400 aa34.83■■■■□ 3.17
LDB1-204ENST00000490751 FAM50BQ9Y247 325 aa34.83■■■■□ 3.17
LDB1-204ENST00000490751 AGMOQ6ZNB7 445 aa34.82■■■■□ 3.16
LDB1-204ENST00000490751 MRPL10Q7Z7H8 261 aaKnown RBP34.82■■■■□ 3.16
LDB1-204ENST00000490751 MCPH1Q8NEM0 835 aa34.82■■■■□ 3.16
LDB1-204ENST00000490751 TCF25Q9BQ70 676 aa34.82■■■■□ 3.16
LDB1-204ENST00000490751 ENTPD7Q9NQZ7 604 aa34.82■■■■□ 3.16
LDB1-204ENST00000490751 LRWD1Q9UFC0 647 aa34.82■■■■□ 3.16
LDB1-204ENST00000490751 NT5C1B-RDH14C9J2C7 533 aa34.81■■■■□ 3.16
LDB1-204ENST00000490751 PER2O15055 1255 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms