RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 FAM50BQ9Y247 325 aa19.4■□□□□ 0.7
SEC13-218ENST00000490283 CARNS1A5YM72 827 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 INO80B-WBP1J3KQ70 363 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 MED24O75448 989 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 SPATA31C1P0DKV0 1188 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 MUTP22033 750 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 RPA1P27694 616 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 FXR2P51116 673 aaKnown RBP eCLIP19.39■□□□□ 0.69
SEC13-218ENST00000490283 KRT17Q04695 432 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 POU5F1BQ06416 359 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 CLLU1OSQ5K130 101 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 POLR3FQ9H1D9 316 aaPredicted RBP19.39■□□□□ 0.69
SEC13-218ENST00000490283 IGFLR1Q9H665 355 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 TLR9Q9NR96 1032 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 HCSTQ9UBK5 93 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 LRWD1Q9UFC0 647 aa19.39■□□□□ 0.69
SEC13-218ENST00000490283 ARHGEF35A5YM69 484 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 CD2BP2O95400 341 aaKnown RBP19.38■□□□□ 0.69
SEC13-218ENST00000490283 ATF7P17544 494 aaPredicted RBP19.38■□□□□ 0.69
SEC13-218ENST00000490283 DNAJB1P25685 340 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 AXLP30530 894 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 CCT6AP40227 531 aaKnown RBP19.38■□□□□ 0.69
SEC13-218ENST00000490283 PTENP60484 403 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 HYAL1Q12794 435 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 PTGDRQ13258 359 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 NBR1Q14596 966 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 RILPL1Q5EBL4 403 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 PDE12Q6L8Q7 609 aaKnown RBP19.38■□□□□ 0.69
SEC13-218ENST00000490283 POTEGQ6S5H5 508 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 KCNT2Q6UVM3 1135 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 URGCPQ8TCY9 931 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 MINDY3Q9H8M7 445 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 LZTS1Q9Y250 596 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 PCDHB2Q9Y5E7 798 aa19.38■□□□□ 0.69
SEC13-218ENST00000490283 FSD2A1L4K1 749 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 H3BQ06 376 aaPredicted RBP19.37■□□□□ 0.69
SEC13-218ENST00000490283 ZNF623O75123 536 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 ARL2P36404 184 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 ALDH7A1P49419 539 aaKnown RBP19.37■□□□□ 0.69
SEC13-218ENST00000490283 RNASELQ05823 741 aaKnown RBP19.37■□□□□ 0.69
SEC13-218ENST00000490283 CAPSQ13938 189 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 CAMK1Q14012 370 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 PDIA5Q14554 519 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 LONRF3Q496Y0 759 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 PTCRAQ6ISU1 281 aaPredicted RBP19.37■□□□□ 0.69
SEC13-218ENST00000490283 NOTUMQ6P988 496 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 LRRC55Q6ZSA7 311 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 MAEAQ7L5Y9 396 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 CNNM3Q8NE01 707 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 ASAP3Q8TDY4 903 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 MRPS27Q92552 414 aaKnown RBP19.37■□□□□ 0.69
SEC13-218ENST00000490283 LPPQ93052 612 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 CCDC51Q96ER9 411 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 SPG21Q9NZD8 308 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 INPP5FQ9Y2H2 1132 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 PCDHB6Q9Y5E3 794 aa19.37■□□□□ 0.69
SEC13-218ENST00000490283 CNTNAP2Q9UHC6 1331 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 A0A087WWV3 80 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 LRRIQ4A6NIV6 560 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 IRS1P35568 1242 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 NDUFV1P49821 464 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 PLCB3Q01970 1234 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 BMS1Q14692 1282 aaKnown RBP19.36■□□□□ 0.69
SEC13-218ENST00000490283 COL19A1Q14993 1142 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 NOMO2Q5JPE7 1267 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 DTHD1Q6ZMT9 781 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 IFNLR1Q8IU57 520 aaPredicted RBP19.36■□□□□ 0.69
SEC13-218ENST00000490283 HACE1Q8IYU2 909 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 SNX29Q8TEQ0 813 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 NECAB3Q96P71 396 aaPredicted RBP19.36■□□□□ 0.69
SEC13-218ENST00000490283 NFKBIZQ9BYH8 718 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 ENTPD7Q9NQZ7 604 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 FNDC1Q4ZHG4 1894 aaPredicted RBP19.36■□□□□ 0.69
SEC13-218ENST00000490283 TTC28Q96AY4 2481 aa19.36■□□□□ 0.69
SEC13-218ENST00000490283 ZC3H11AO75152 810 aaKnown RBP eCLIP19.35■□□□□ 0.69
SEC13-218ENST00000490283 GLRA2P23416 452 aa19.35■□□□□ 0.69
SEC13-218ENST00000490283 PRPHP41219 470 aa19.35■□□□□ 0.69
SEC13-218ENST00000490283 NRIP1P48552 1158 aa19.35■□□□□ 0.69
SEC13-218ENST00000490283 TOB1P50616 345 aaPredicted RBP19.35■□□□□ 0.69
SEC13-218ENST00000490283 KRT79Q5XKE5 535 aa19.35■□□□□ 0.69
SEC13-218ENST00000490283 PADI6Q6TGC4 694 aa19.35■□□□□ 0.69
SEC13-218ENST00000490283 ZBTB8OSQ8IWT0 167 aa19.35■□□□□ 0.69
SEC13-218ENST00000490283 C4orf32Q8N8J7 132 aa19.35■□□□□ 0.69
SEC13-218ENST00000490283 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.35■□□□□ 0.69
SEC13-218ENST00000490283 TRIM6Q9C030 488 aaPredicted RBP19.35■□□□□ 0.69
SEC13-218ENST00000490283 TLE6Q9H808 572 aa19.35■□□□□ 0.69
SEC13-218ENST00000490283 RSAD1Q9HA92 442 aa19.35■□□□□ 0.69
SEC13-218ENST00000490283 UBN1Q9NPG3 1134 aa19.35■□□□□ 0.69
SEC13-218ENST00000490283 TSPAN1O60635 241 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 SRGAP2BP0DMP2 458 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 HOXA11P31270 313 aaPredicted RBP19.34■□□□□ 0.69
SEC13-218ENST00000490283 PBX3P40426 434 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 BCAR1P56945 870 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 MBTD1Q05BQ5 628 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 CTC1Q2NKJ3 1217 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 LARP1BQ659C4 914 aaKnown RBP19.34■□□□□ 0.69
SEC13-218ENST00000490283 RBM23Q86U06 439 aaKnown RBP19.34■□□□□ 0.69
SEC13-218ENST00000490283 EFHBQ8N7U6 833 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 IGSF22Q8N9C0 903 aa19.34■□□□□ 0.69
SEC13-218ENST00000490283 TMEM169Q96HH4 297 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms