RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.97■■□□□ 1.11
SMC4-222ENST00000490207 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.96■■□□□ 1.11
SMC4-222ENST00000490207 KCNA5P22460 613 aa21.96■■□□□ 1.11
SMC4-222ENST00000490207 DNAJB1P25685 340 aa21.96■■□□□ 1.11
SMC4-222ENST00000490207 PTENP60484 403 aa21.96■■□□□ 1.11
SMC4-222ENST00000490207 PTGDRQ13258 359 aa21.96■■□□□ 1.11
SMC4-222ENST00000490207 CAPSQ13938 189 aa21.96■■□□□ 1.11
SMC4-222ENST00000490207 CAMK1Q14012 370 aa21.96■■□□□ 1.11
SMC4-222ENST00000490207 LRRC55Q6ZSA7 311 aa21.96■■□□□ 1.11
SMC4-222ENST00000490207 PABPC5Q96DU9 382 aaKnown RBP21.96■■□□□ 1.11
SMC4-222ENST00000490207 MRPL9Q9BYD2 267 aaKnown RBP21.96■■□□□ 1.11
SMC4-222ENST00000490207 MYO7AQ13402 2215 aa21.96■■□□□ 1.11
SMC4-222ENST00000490207 ERLIN2O94905 339 aa21.95■■□□□ 1.1
SMC4-222ENST00000490207 GLRA2P23416 452 aa21.95■■□□□ 1.1
SMC4-222ENST00000490207 ARL2P36404 184 aa21.95■■□□□ 1.1
SMC4-222ENST00000490207 CCT6AP40227 531 aaKnown RBP21.95■■□□□ 1.1
SMC4-222ENST00000490207 UBE3AQ05086 875 aa21.95■■□□□ 1.1
SMC4-222ENST00000490207 LPPQ93052 612 aa21.95■■□□□ 1.1
SMC4-222ENST00000490207 BACH2Q9BYV9 841 aa21.95■■□□□ 1.1
SMC4-222ENST00000490207 RAB34Q9BZG1 259 aa21.95■■□□□ 1.1
SMC4-222ENST00000490207 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.95■■□□□ 1.1
SMC4-222ENST00000490207 LRWD1Q9UFC0 647 aa21.95■■□□□ 1.1
SMC4-222ENST00000490207 LAD1O00515 517 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 FGF18O76093 207 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 MUTP22033 750 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 IRS1P35568 1242 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 COL19A1Q14993 1142 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 PCBP1Q15365 356 aaKnown RBP eCLIP21.94■■□□□ 1.16e-13■■□□□ 12.1
SMC4-222ENST00000490207 RILPL1Q5EBL4 403 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 EP400NLQ6ZTU2 488 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 IFNLR1Q8IU57 520 aaPredicted RBP21.94■■□□□ 1.1
SMC4-222ENST00000490207 MCPH1Q8NEM0 835 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 RSPH1Q8WYR4 309 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 PPP2R3CQ969Q6 453 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 ZNF558Q96NG5 402 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 CLDND1Q9NY35 253 aa21.94■■□□□ 1.1
SMC4-222ENST00000490207 ARHGEF35A5YM69 484 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 INO80B-WBP1J3KQ70 363 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 NCK2O43639 380 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 ZNF623O75123 536 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 PPM1AP35813 382 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 PRPHP41219 470 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 MBTD1Q05BQ5 628 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 POU5F1BQ06416 359 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 HYAL1Q12794 435 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 LEXMQ3ZCV2 418 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 LONRF3Q496Y0 759 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 KCNT2Q6UVM3 1135 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 MAEAQ7L5Y9 396 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 IGSF22Q8N9C0 903 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 SNX29Q8TEQ0 813 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 GPRC5CQ9NQ84 441 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 TLR9Q9NR96 1032 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 PCDHB2Q9Y5E7 798 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 STK24Q9Y6E0 443 aa21.93■■□□□ 1.1
SMC4-222ENST00000490207 TNFRSF10AO00220 468 aa21.92■■□□□ 1.1
SMC4-222ENST00000490207 TSPAN1O60635 241 aa21.92■■□□□ 1.1
SMC4-222ENST00000490207 HOXA11P31270 313 aaPredicted RBP21.92■■□□□ 1.1
SMC4-222ENST00000490207 PBX3P40426 434 aa21.92■■□□□ 1.1
SMC4-222ENST00000490207 PDIA5Q14554 519 aa21.92■■□□□ 1.1
SMC4-222ENST00000490207 PADI6Q6TGC4 694 aa21.92■■□□□ 1.1
SMC4-222ENST00000490207 GLB1LQ6UWU2 654 aa21.92■■□□□ 1.1
SMC4-222ENST00000490207 PGBD4Q96DM1 585 aa21.92■■□□□ 1.1
SMC4-222ENST00000490207 NECAB3Q96P71 396 aaPredicted RBP21.92■■□□□ 1.1
SMC4-222ENST00000490207 NFKBIZQ9BYH8 718 aa21.92■■□□□ 1.1
SMC4-222ENST00000490207 LRRIQ4A6NIV6 560 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 MEIS3P2A8K0S8 358 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 H3BQ06 376 aaPredicted RBP21.91■■□□□ 1.1
SMC4-222ENST00000490207 AXLP30530 894 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 GTF2F1P35269 517 aaKnown RBP eCLIP21.91■■□□□ 1.1
SMC4-222ENST00000490207 PLCB3Q01970 1234 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 ECM1Q16610 540 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 UBXN11Q5T124 520 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 LARP1BQ659C4 914 aaKnown RBP21.91■■□□□ 1.1
SMC4-222ENST00000490207 NOTUMQ6P988 496 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 ADGRD2Q7Z7M1 963 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 MRPS27Q92552 414 aaKnown RBP21.91■■□□□ 1.1
SMC4-222ENST00000490207 CCDC51Q96ER9 411 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 IGFLR1Q9H665 355 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 LZTS1Q9Y250 596 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 INPP5FQ9Y2H2 1132 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 PCDHGC5Q9Y5F6 944 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 TTC28Q96AY4 2481 aa21.91■■□□□ 1.1
SMC4-222ENST00000490207 ATP2C1P98194 919 aaPredicted RBP21.9■■□□□ 1.1
SMC4-222ENST00000490207 CUL4AQ13619 759 aa21.9■■□□□ 1.1
SMC4-222ENST00000490207 NOMO2Q5JPE7 1267 aa21.9■■□□□ 1.1
SMC4-222ENST00000490207 DTHD1Q6ZMT9 781 aa21.9■■□□□ 1.1
SMC4-222ENST00000490207 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.9■■□□□ 1.1
SMC4-222ENST00000490207 CPB2Q96IY4 423 aa21.9■■□□□ 1.1
SMC4-222ENST00000490207 DDX19AQ9NUU7 478 aaKnown RBP21.9■■□□□ 1.1
SMC4-222ENST00000490207 KIAA1024Q9UPX6 916 aa21.9■■□□□ 1.1
SMC4-222ENST00000490207 CNTNAP2Q9UHC6 1331 aa21.89■■□□□ 1.1
SMC4-222ENST00000490207 PP2D1A8MPX8 630 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 ZC3H11AO75152 810 aaKnown RBP eCLIP21.89■■□□□ 1.09
SMC4-222ENST00000490207 OFD1O75665 1012 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 CYP11B2P19099 503 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 NCBP1Q09161 790 aaKnown RBP21.89■■□□□ 1.09
SMC4-222ENST00000490207 IL17AQ16552 155 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 AMHR2Q16671 573 aa21.89■■□□□ 1.09
SMC4-222ENST00000490207 CTC1Q2NKJ3 1217 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms