RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 DUSP12Q9UNI6 340 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 V9GY48 417 aaPredicted RBP9.27□□□□□ -0.93
USP39-216ENST00000490193 FANCMQ8IYD8 2048 aa9.27□□□□□ -0.93
USP39-216ENST00000490193 WDR64B1ANS9 1081 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 NT5C1B-RDH14C9J2C7 533 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 ZNF862O60290 1169 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 OATP04181 439 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 CIITAP33076 1130 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 PHKA2P46019 1235 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 METAP2P50579 478 aaKnown RBP eCLIP9.26□□□□□ -0.932e-7■■■□□ 16.1
USP39-216ENST00000490193 CDC42EP1Q00587 391 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 TDGQ13569 410 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 RTN1Q16799 776 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 C15orf39Q6ZRI6 1047 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 OTOP3Q7RTS5 596 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 GPR149Q86SP6 731 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 TMEM173Q86WV6 379 aaPredicted RBP9.26□□□□□ -0.93
USP39-216ENST00000490193 ADSSL1Q8N142 457 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 RNF169Q8NCN4 708 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 LENG9Q96B70 501 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 ACSF2Q96CM8 615 aaPredicted RBP9.26□□□□□ -0.93
USP39-216ENST00000490193 IGSF21Q96ID5 467 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 ZMYND12Q9H0C1 365 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 SFXN1Q9H9B4 322 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 FAM217BQ9NTX9 383 aaPredicted RBP9.26□□□□□ -0.93
USP39-216ENST00000490193 STK39Q9UEW8 545 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 TCEAL9Q9UHQ7 104 aa9.26□□□□□ -0.93
USP39-216ENST00000490193 DNAH14Q0VDD8 3507 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 ZBTB43O43298 467 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 PI15O43692 258 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 ZNF623O75123 536 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 ZC3H11AO75152 810 aaKnown RBP eCLIP9.25□□□□□ -0.93
USP39-216ENST00000490193 GALTP07902 379 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 SKIP12755 728 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 EXOSC10Q01780 885 aaKnown RBP9.25□□□□□ -0.93
USP39-216ENST00000490193 PRKCEQ02156 737 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 ANGPT1Q15389 498 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 TARBP2Q15633 366 aaKnown RBP9.25□□□□□ -0.93
USP39-216ENST00000490193 PTPN14Q15678 1187 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 PFKFB3Q16875 520 aaPredicted RBP9.25□□□□□ -0.93
USP39-216ENST00000490193 JAKMIP3Q5VZ66 844 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 KANK3Q6NY19 840 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 TMC5Q6UXY8 1006 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 CCDC149Q6ZUS6 474 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 CABP7Q86V35 215 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 CMASQ8NFW8 434 aaPredicted RBP9.25□□□□□ -0.93
USP39-216ENST00000490193 TMC2Q8TDI7 906 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 BCL7CQ8WUZ0 217 aaPredicted RBP9.25□□□□□ -0.93
USP39-216ENST00000490193 AUTS2Q8WXX7 1259 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 ESYT1Q9BSJ8 1104 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 RHOBTB2Q9BYZ6 727 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 SEMA4AQ9H3S1 761 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 NRDE2Q9H7Z3 1164 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 NRBP2Q9NSY0 501 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 TBC1D13Q9NVG8 400 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 IGSF9Q9P2J2 1179 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 BRPF3Q9ULD4 1205 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 DOCK8Q8NF50 2099 aa9.25□□□□□ -0.93
USP39-216ENST00000490193 MTCL1Q9Y4B5 1905 aaKnown RBP9.25□□□□□ -0.93
USP39-216ENST00000490193 EP300Q09472 2414 aaPredicted RBP9.24□□□□□ -0.93
USP39-216ENST00000490193 IGKV6-21A0A0C4DH24 114 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 ADAMTS3O15072 1205 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 LILRB3O75022 631 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 KRT37O76014 449 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 PAPLNO95428 1278 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 FGFR4P22455 802 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 CDC27P30260 824 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 SFNP31947 248 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 CA8P35219 290 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 RAB27AP51159 221 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 CLCN4P51793 760 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 TBC1D8BQ0IIM8 1120 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 PRR16Q569H4 304 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 NOMO2Q5JPE7 1267 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 GLB1LQ6UWU2 654 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 CYP26C1Q6V0L0 522 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 TRMT1LQ7Z2T5 733 aaKnown RBP9.24□□□□□ -0.93
USP39-216ENST00000490193 REXO1Q8N1G1 1221 aaKnown RBP9.24□□□□□ -0.93
USP39-216ENST00000490193 DTWD2Q8NBA8 298 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 TMEM87AQ8NBN3 555 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 FLCNQ8NFG4 579 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 FEZF2Q8TBJ5 459 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 CCDC12Q8WUD4 166 aaPredicted RBP9.24□□□□□ -0.93
USP39-216ENST00000490193 NLRP7Q8WX94 980 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 CEP89Q96ST8 783 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 RIT2Q99578 217 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 VN1R3Q9BXE9 311 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 GCOM2Q9BZD3 368 aaPredicted RBP9.24□□□□□ -0.93
USP39-216ENST00000490193 KCNK12Q9HB15 430 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 DISC1Q9NRI5 854 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 FAM105AQ9NUU6 356 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 KMT2BQ9UMN6 2715 aaPredicted RBP9.24□□□□□ -0.93
USP39-216ENST00000490193 NID2Q14112 1375 aa9.24□□□□□ -0.93
USP39-216ENST00000490193 CACNA1BQ00975 2339 aa9.23□□□□□ -0.93
USP39-216ENST00000490193 GOLGA8AA7E2F4 631 aa9.23□□□□□ -0.93
USP39-216ENST00000490193 GOLGA8BA8MQT2 603 aa9.23□□□□□ -0.93
USP39-216ENST00000490193 EDIL3O43854 480 aa9.23□□□□□ -0.93
USP39-216ENST00000490193 B4GALT3O60512 393 aa9.23□□□□□ -0.93
USP39-216ENST00000490193 OFD1O75665 1012 aa9.23□□□□□ -0.93
USP39-216ENST00000490193 SFPQP23246 707 aaKnown RBP eCLIP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms