RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 DTNBP1Q96EV8 351 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 ZNF560Q96MR9 790 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 KRT82Q9NSB4 513 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 PLAAQ9Y263 795 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 COBLO75128 1261 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 IMPG1Q17R60 797 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 DOK7Q18PE1 504 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 RFFLQ8WZ73 363 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 SNX19Q92543 992 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 CHMP6Q96FZ7 201 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 ZFP69BQ9UJL9 534 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 PCDHA6Q9UN73 950 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 PCDHA8Q9Y5H6 950 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 ARHGEF9O43307 516 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 PALMO75781 387 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 PMS2P54278 862 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 KCNH2Q12809 1159 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 USP17L2Q6R6M4 530 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 PARD3BQ8TEW8 1205 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 OPTNQ96CV9 577 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 TSPAN17Q96FV3 270 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 CLIC2O15247 247 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 ORC4O43929 436 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 GRM4Q14833 912 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 E2F5Q15329 346 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 HIBCHQ6NVY1 386 aaPredicted RBP9.4□□□□□ -0.9
LSAMP-205ENST00000490035 TRMT10CQ7L0Y3 403 aaKnown RBP9.4□□□□□ -0.9
LSAMP-205ENST00000490035 CFAP36Q96G28 342 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 HOXD10P28358 340 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 SETD3Q86TU7 594 aaPredicted RBP9.4□□□□□ -0.9
LSAMP-205ENST00000490035 LCORLQ8N3X6 602 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 OSBP2Q969R2 916 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 NEUROG2Q9H2A3 272 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 GINM1Q9NU53 330 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 DNAJC12Q9UKB3 198 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 PNPLA7Q6ZV29 1317 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 H3BRJ5 948 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 RAD51Q06609 339 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 P3H1Q32P28 736 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 MTERF2Q49AM1 385 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 POTEAQ6S8J7 498 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 TRIM59Q8IWR1 403 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 TEX9Q8N6V9 391 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 BFARQ9NZS9 450 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 MAFGO15525 162 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 RTN2O75298 545 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 SYF2O95926 243 aaKnown RBP9.4□□□□□ -0.9
LSAMP-205ENST00000490035 NR5A1Q13285 461 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 ZNF341Q9BYN7 854 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 ADAMTS1Q9UHI8 967 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 IL10P22301 178 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 SDC4P31431 198 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 MCUQ8NE86 351 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 ASAP3Q8TDY4 903 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 TNIP3Q96KP6 325 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 FRMD8P1Q9BZ68 369 aaPredicted RBP9.4□□□□□ -0.9
LSAMP-205ENST00000490035 SAYSD1Q9NPB0 183 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 CAPN11Q9UMQ6 739 aa9.4□□□□□ -0.9
LSAMP-205ENST00000490035 RSPH10B2B2RC85 870 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 MTSS1O43312 755 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 FTCDO95954 541 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 RSPH10BP0C881 870 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 DALRD3Q5D0E6 543 aaKnown RBP9.4□□□□□ -0.91
LSAMP-205ENST00000490035 UVRAGQ9P2Y5 699 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 E9PCH4 1651 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 UBN2Q6ZU65 1347 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 SSU72P8A0A1W2PR75 194 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 POTEB3A0JP26 581 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 TBX3O15119 743 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 CYP2E1P05181 493 aaPredicted RBP9.4□□□□□ -0.91
LSAMP-205ENST00000490035 PEX3P56589 373 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 EFHC2Q5JST6 749 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 POTEBQ6S5H4 581 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 TRAPPC11Q7Z392 1133 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 ANKRD13CQ8N6S4 541 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 CCSER1Q9C0I3 900 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 WWP1Q9H0M0 922 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 CDV3Q9UKY7 258 aaKnown RBP9.4□□□□□ -0.91
LSAMP-205ENST00000490035 PCDHB6Q9Y5E3 794 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 PDXKO00764 312 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 CDC27P30260 824 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 SERPINB9P50453 376 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 ATP2C1P98194 919 aaPredicted RBP9.4□□□□□ -0.91
LSAMP-205ENST00000490035 BYSLQ13895 437 aaKnown RBP9.4□□□□□ -0.91
LSAMP-205ENST00000490035 GRAMD1BQ3KR37 738 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 LRIG3Q6UXM1 1119 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 ZNF512BQ96KM6 892 aaPredicted RBP9.4□□□□□ -0.91
LSAMP-205ENST00000490035 PUS7LQ9H0K6 701 aaKnown RBP9.4□□□□□ -0.91
LSAMP-205ENST00000490035 TBK1Q9UHD2 729 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 BLOC1S6Q9UL45 172 aa9.4□□□□□ -0.91
LSAMP-205ENST00000490035 PIGHQ14442 188 aaPredicted RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 MXD4Q14582 209 aaPredicted RBP9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ZNF677Q86XU0 584 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 DTX3LQ8TDB6 740 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 BHMT2Q9H2M3 363 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ZWILCHQ9H900 591 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ABCB6Q9NP58 842 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 ALKQ9UM73 1620 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 CFAP69A5D8W1 941 aa9.39□□□□□ -0.91
LSAMP-205ENST00000490035 HSPA9P38646 679 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms